RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 CCDC13Q8IYE1 715 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 ANKRD20A12PQ8NF67 263 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 FBXO30Q8TB52 745 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 SETD6Q8TBK2 473 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 FCAMRQ8WWV6 532 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 PHF21AQ96BD5 680 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 INTS12Q96CB8 462 aaKnown RBP3.82□□□□□ -1.8
ITGB1-208ENST00000464001 SAAL1Q96ER3 474 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 TMEM68Q96MH6 324 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 SRSF8Q9BRL6 282 aaKnown RBP3.82□□□□□ -1.8
ITGB1-208ENST00000464001 SPXQ9BT56 116 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 KRT23Q9C075 422 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 KIF9Q9HAQ2 790 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 JRKLQ9Y4A0 524 aa3.82□□□□□ -1.8
ITGB1-208ENST00000464001 IGSF1Q8N6C5 1336 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 OR6C76A6NM76 312 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 ANKRD66B4E2M5 251 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 FAM90A26D6RGX4 464 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 M0QZ24 198 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 SNAP23O00161 211 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 ANKRD28O15084 1053 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 ADAMDEC1O15204 470 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 WDR46O15213 610 aaKnown RBP3.81□□□□□ -1.8
ITGB1-208ENST00000464001 BUD23O43709 281 aaKnown RBP3.81□□□□□ -1.8
ITGB1-208ENST00000464001 SEC14L2O76054 403 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 PNPP00491 289 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 GABRB1P18505 474 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 UBA1P22314 1058 aaKnown RBP3.81□□□□□ -1.8
ITGB1-208ENST00000464001 NR2F2P24468 414 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 HOXA13P31271 388 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-208ENST00000464001 HSPA4P34932 840 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 PRKCIP41743 596 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 SLC15A1P46059 708 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 CCR10P46092 362 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 LIG4P49917 911 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 OLIG2Q13516 323 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 ITGA9Q13797 1035 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 RCN2Q14257 317 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 TYSND1Q2T9J0 566 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 ALG11Q2TAA5 492 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 HFEQ30201 348 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 ZC2HC1CQ53FD0 456 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-208ENST00000464001 KIAA0930Q6ICG6 404 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-208ENST00000464001 ZCCHC12Q6PEW1 402 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 PIWIL4Q7Z3Z4 852 aaKnown RBP3.81□□□□□ -1.8
ITGB1-208ENST00000464001 CNTN4Q8IWV2 1026 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 SYCP3Q8IZU3 236 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 LYG1Q8N1E2 194 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 SIX6OS1Q8N1H7 587 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 SFRP1Q8N474 314 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 TMEM116Q8NCL8 245 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 SLC44A1Q8WWI5 657 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 IGSF8Q969P0 613 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 SYAP1Q96A49 352 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-208ENST00000464001 SAT2Q96F10 170 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-208ENST00000464001 CNDP1Q96KN2 507 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 PYGO2Q9BRQ0 406 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 STRA6Q9BX79 667 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 SLC28A3Q9HAS3 691 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 SCPEP1Q9HB40 452 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 ZBTB20Q9HC78 741 aaPredicted RBP3.81□□□□□ -1.8
ITGB1-208ENST00000464001 PFDN4Q9NQP4 134 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 TAS2R3Q9NYW6 316 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 HOOK1Q9UJC3 728 aaKnown RBP3.81□□□□□ -1.8
ITGB1-208ENST00000464001 HPCAL4Q9UM19 191 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 NENFQ9UMX5 172 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 EXOC7Q9UPT5 735 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 SMC3Q9UQE7 1217 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 LIPT1Q9Y234 373 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 RNF215Q9Y6U7 377 aa3.81□□□□□ -1.8
ITGB1-208ENST00000464001 SPAG9O60271 1321 aaKnown RBP3.8□□□□□ -1.8
ITGB1-208ENST00000464001 FAM237AA0A1B0GTK4 181 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 A0A1W2PQF6 199 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 ARHGEF37A1IGU5 675 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 LRRD1A4D1F6 860 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 PES1O00541 588 aaKnown RBP3.8□□□□□ -1.8
ITGB1-208ENST00000464001 PGRMC2O15173 223 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 RIPK2O43353 540 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 TADA2AO75478 443 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 IFNB1P01574 187 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 ABCB1P08183 1280 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-208ENST00000464001 SUPT20HL2P0C7V6 817 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 SFTPCP11686 197 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 FERP16591 822 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 CDH2P19022 906 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-208ENST00000464001 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 RABIFP47224 123 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 PIP4K2AP48426 406 aaPredicted RBP3.8□□□□□ -1.8
ITGB1-208ENST00000464001 EIF3BP55884 814 aaKnown RBP3.8□□□□□ -1.8
ITGB1-208ENST00000464001 OLR1P78380 273 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 PRAMEP78395 509 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 PTK6Q13882 451 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 SNTB1Q13884 538 aaKnown RBP3.8□□□□□ -1.8
ITGB1-208ENST00000464001 TUBB2AQ13885 445 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 MEP1BQ16820 701 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 CRY2Q49AN0 593 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 SLC39A12Q504Y0 691 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 ASPRV1Q53RT3 343 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
ITGB1-208ENST00000464001 CDC73Q6P1J9 531 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms