RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 POLHQ9Y253 713 aa3.63□□□□□ -1.83
SCFD1-204ENST00000463622 HELZP42694 1942 aaKnown RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 PLXND1Q9Y4D7 1925 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 K7ENP7 123 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 PSTPIP1O43586 416 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 TIMM44O43615 452 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 CREB3O43889 395 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 PRPSAP2O60256 369 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 CEP104O60308 925 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 URI1O94763 535 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 IL33O95760 270 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ZFXP17010 805 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 CKMT2P17540 419 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 WT1P19544 449 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ITGALP20701 1170 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ACP1P24666 158 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 MSNP26038 577 aaKnown RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ACSL1P33121 698 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 HK3P52790 923 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 CDH6P55285 790 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 E2F1Q01094 437 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 GBE1Q04446 702 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 C2orf54Q08AI8 447 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 DNAJC3Q13217 504 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 DPYSQ14117 519 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 STARD3Q14849 445 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 RPS6KA1Q15418 735 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 DPYSL2Q16555 572 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 PPP6R3Q5H9R7 873 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 FSCBQ5H9T9 825 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ERMARDQ5T6L9 678 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 PPP1R2P3Q6NXS1 205 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 INO80CQ6PI98 192 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 USP45Q70EL2 814 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 TFAP2DQ7Z6R9 452 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 NLRP14Q86W24 1093 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ARHGAP12Q8IWW6 846 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 FAM217AQ8IXS0 508 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 LSMEM2Q8N112 164 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 RASGEF1CQ8N431 466 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 PRR18Q8N4B5 295 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 NOA1Q8NC60 698 aaKnown RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 PRCCQ92733 491 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 NTAN1Q96AB6 310 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 BIRC7Q96CA5 298 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ERLEC1Q96DZ1 483 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 CELF6Q96J87 481 aaKnown RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 PBKQ96KB5 322 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 NSMCE3Q96MG7 304 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 SERPINB11Q96P15 392 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 XPO6Q96QU8 1125 aaKnown RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 BBS2Q9BXC9 721 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 AP1M1Q9BXS5 423 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 WDCPQ9H6R7 721 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ERVMER34-1Q9H9K5 563 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 STARD5Q9NSY2 213 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 HBS1LQ9Y450 684 aaKnown RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 JRKLQ9Y4A0 524 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 MYO18AQ92614 2054 aaKnown RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 MYO9AB2RTY4 2548 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 SPTAN1Q13813 2472 aaKnown RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 A0A0D9SEW6 157 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 A0A1W2PR77 199 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 GOLGA6L9A6NEM1 432 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ZSCAN5CA6NGD5 496 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 RNF103O00237 685 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 YKT6O15498 198 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ACSL4O60488 711 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 SYNCRIPO60506 623 aaKnown RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 RNF8O76064 485 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 MT-CO3P00414 261 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 PENKP01210 267 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 FGGP02679 453 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 WNT1P04628 370 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 IGHV4-34P06331 123 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 HNRNPCP07910 306 aaKnown RBP eCLIP3.62□□□□□ -1.838e-7■□□□□ 9.9
SCFD1-204ENST00000463622 ETS1P14921 441 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ERCC2P18074 760 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ITGB6P18564 788 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 HOXD9P28356 352 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 CASQ1P31415 396 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 CCR1P32246 355 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 SLC1A1P43005 524 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 KCNJ1P48048 391 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ZNF134P52741 427 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 RWDD2BP57060 319 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ZBTB16Q05516 673 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 IHHQ14623 411 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 E2F5Q15329 346 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 TRADDQ15628 312 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ARL13BQ3SXY8 428 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 LINC00303Q3SY05 128 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 ANKRD20A8PQ5CZ79 823 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 LRRC38Q5VT99 294 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 CXorf57Q6NSI4 855 aaKnown RBP3.62□□□□□ -1.83
SCFD1-204ENST00000463622 TMEM108Q6UXF1 575 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 LEKR1Q6ZMV7 388 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 TPGS1Q6ZTW0 290 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 RFX8Q6ZV50 586 aa3.62□□□□□ -1.83
SCFD1-204ENST00000463622 CHSY1Q86X52 802 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms