RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 HEBP2Q9Y5Z4 205 aa15.11■□□□□ 0.01
SND1-203ENST00000463020 PRSS21Q9Y6M0 314 aa15.11■□□□□ 0.01
SND1-203ENST00000463020 NUP210LQ5VU65 1888 aa15.11■□□□□ 0.01
SND1-203ENST00000463020 SNRNP200O75643 2136 aaKnown RBP15.11■□□□□ 0.01
SND1-203ENST00000463020 SETD2Q9BYW2 2564 aaPredicted RBP15.1■□□□□ 0.01
SND1-203ENST00000463020 C2CD3Q4AC94 2353 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 DOCK10Q96BY6 2186 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 IGLV3-16A0A075B6K0 115 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 CTAGE9A4FU28 777 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 EFCAB8A8MWE9 144 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 PEX12O00623 359 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 ZSCAN9O15535 394 aaPredicted RBP15.1■□□□□ 0.01
SND1-203ENST00000463020 ITGA3P26006 1051 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 RBL1P28749 1068 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 SRSF11Q05519 484 aaKnown RBP15.1■□□□□ 0.01
SND1-203ENST00000463020 Q0VFX4 171 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 SPARCL1Q14515 664 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 NKAIN1Q4KMZ8 207 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 SP5Q6BEB4 398 aaPredicted RBP15.1■□□□□ 0.01
SND1-203ENST00000463020 DENND5AQ6IQ26 1287 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 RANBP10Q6VN20 620 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 ZNF662Q6ZS27 426 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 SHISA6Q6ZSJ9 500 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 COX15Q7KZN9 410 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 KIAA1328Q86T90 577 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 GPR135Q8IZ08 494 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 DNAJC22Q8N4W6 341 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 ACRBPQ8NEB7 543 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 DCUN1D1Q96GG9 259 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 GBA3Q9H227 469 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 GPN3Q9UHW5 284 aaPredicted RBP15.1■□□□□ 0.01
SND1-203ENST00000463020 ENTPD4Q9Y227 616 aa15.1■□□□□ 0.01
SND1-203ENST00000463020 hCG_1818297A0A087WSY0 165 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 AGPSO00116 658 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 CHRM5P08912 532 aaPredicted RBP15.09■□□□□ 0.01
SND1-203ENST00000463020 HBQ1P09105 142 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 PSMB4P28070 264 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 ARHGAP25P42331 645 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 SPA17Q15506 151 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 IGFL2Q6UWQ7 119 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 MCEMP1Q8IX19 187 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 PIANPQ8IYJ0 282 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 CATSPER1Q8NEC5 780 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 TFGQ92734 400 aaPredicted RBP15.09■□□□□ 0.01
SND1-203ENST00000463020 PTERQ96BW5 349 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 DNAJC1Q96KC8 554 aaKnown RBP15.09■□□□□ 0.01
SND1-203ENST00000463020 CNDP1Q96KN2 507 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 IP6K3Q96PC2 410 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 COPS8Q99627 209 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 FAM118BQ9BPY3 351 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 MVB12BQ9H7P6 319 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 ATP13A2Q9NQ11 1180 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 ARGLU1Q9NWB6 273 aaPredicted RBP15.09■□□□□ 0.01
SND1-203ENST00000463020 NDOR1Q9UHB4 597 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 LCMT1Q9UIC8 334 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 MRFAP1Q9Y605 127 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 HS3ST3B1Q9Y662 390 aa15.09■□□□□ 0.01
SND1-203ENST00000463020 TRBV5-4A0A0C4DH59 114 aa15.08■□□□□ 0
SND1-203ENST00000463020 C17orf113A0A1B0GUU1 675 aa15.08■□□□□ 0
SND1-203ENST00000463020 KLHL33A6NCF5 533 aa15.08■□□□□ 0
SND1-203ENST00000463020 C2orf81A6NN90 581 aa15.08■□□□□ 0
SND1-203ENST00000463020 HNRNPRO43390 633 aaKnown RBP15.08■□□□□ 0
SND1-203ENST00000463020 PYGMP11217 842 aa15.08■□□□□ 0
SND1-203ENST00000463020 MC4RP32245 332 aa15.08■□□□□ 0
SND1-203ENST00000463020 BRD3Q15059 726 aa15.08■□□□□ 0
SND1-203ENST00000463020 CYP2A13Q16696 494 aa15.08■□□□□ 0
SND1-203ENST00000463020 PRAMEF13Q5VWM6 474 aa15.08■□□□□ 0
SND1-203ENST00000463020 KIRREL2Q6UWL6 708 aa15.08■□□□□ 0
SND1-203ENST00000463020 SNX20Q7Z614 316 aa15.08■□□□□ 0
SND1-203ENST00000463020 FJX1Q86VR8 437 aa15.08■□□□□ 0
SND1-203ENST00000463020 SERPINA9Q86WD7 417 aa15.08■□□□□ 0
SND1-203ENST00000463020 PARP9Q8IXQ6 854 aa15.08■□□□□ 0
SND1-203ENST00000463020 SLC34A3Q8N130 599 aa15.08■□□□□ 0
SND1-203ENST00000463020 CEP112Q8N8E3 955 aa15.08■□□□□ 0
SND1-203ENST00000463020 PROKR1Q8TCW9 393 aa15.08■□□□□ 0
SND1-203ENST00000463020 PPP4R1Q8TF05 950 aa15.08■□□□□ 0
SND1-203ENST00000463020 FAR1Q8WVX9 515 aa15.08■□□□□ 0
SND1-203ENST00000463020 P3H4Q92791 437 aa15.08■□□□□ 0
SND1-203ENST00000463020 CCDC42Q96M95 316 aa15.08■□□□□ 0
SND1-203ENST00000463020 SPSB2Q99619 263 aa15.08■□□□□ 0
SND1-203ENST00000463020 NAPGQ99747 312 aaPredicted RBP15.08■□□□□ 0
SND1-203ENST00000463020 CARD6Q9BX69 1037 aa15.08■□□□□ 0
SND1-203ENST00000463020 TSGA10Q9BZW7 698 aa15.08■□□□□ 0
SND1-203ENST00000463020 NHEJ1Q9H9Q4 299 aaPredicted RBP15.08■□□□□ 0
SND1-203ENST00000463020 DDX56Q9NY93 547 aaKnown RBP15.08■□□□□ 0
SND1-203ENST00000463020 CIDEBQ9UHD4 219 aa15.08■□□□□ 0
SND1-203ENST00000463020 TFR2Q9UP52 801 aa15.08■□□□□ 0
SND1-203ENST00000463020 SVILO95425 2214 aa15.08■□□□□ 0
SND1-203ENST00000463020 A0A0J9YY10 115 aa15.07■□□□□ 0
SND1-203ENST00000463020 PRSS44E7EML9 344 aa15.07■□□□□ 0
SND1-203ENST00000463020 IFRD1O00458 451 aaPredicted RBP15.07■□□□□ 0
SND1-203ENST00000463020 KRT38O76015 456 aa15.07■□□□□ 0
SND1-203ENST00000463020 MED26O95402 600 aa15.07■□□□□ 0
SND1-203ENST00000463020 MCM3P25205 808 aa15.07■□□□□ 0
SND1-203ENST00000463020 ACRV1P26436 265 aa15.07■□□□□ 0
SND1-203ENST00000463020 ACADLP28330 430 aa15.07■□□□□ 0
SND1-203ENST00000463020 TSFMP43897 325 aaKnown RBP15.07■□□□□ 0
SND1-203ENST00000463020 TNNT3P45378 269 aaPredicted RBP15.07■□□□□ 0
SND1-203ENST00000463020 CD151P48509 253 aa15.07■□□□□ 0
SND1-203ENST00000463020 KCNK10P57789 538 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms