RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 HPS4Q9NQG7 708 aa16.54■□□□□ 0.24
ACTB-207ENST00000462494 MRPL17Q9NRX2 175 aaKnown RBP16.54■□□□□ 0.24
ACTB-207ENST00000462494 FAM118AQ9NWS6 357 aa16.54■□□□□ 0.24
ACTB-207ENST00000462494 ZDHHC3Q9NYG2 299 aa16.54■□□□□ 0.24
ACTB-207ENST00000462494 PDE10AQ9Y233 779 aa16.54■□□□□ 0.24
ACTB-207ENST00000462494 NOL3O60936 208 aaKnown RBP16.53■□□□□ 0.24
ACTB-207ENST00000462494 E2F6O75461 281 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 CREG1O75629 220 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 SCELO95171 688 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 SERPINA1P01009 418 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 MYCLP1P12525 358 aaPredicted RBP16.53■□□□□ 0.24
ACTB-207ENST00000462494 EPORP19235 508 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 PRKACGP22612 351 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 S100A3P33764 101 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 PHC1P78364 1004 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 NOGQ13253 232 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 PON2Q15165 354 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 PLEKHG6Q3KR16 790 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 FGD3Q5JSP0 725 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 C10orf111Q8N326 155 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 CBARPQ8N350 705 aaPredicted RBP16.53■□□□□ 0.24
ACTB-207ENST00000462494 PNPT1Q8TCS8 783 aaKnown RBP16.53■□□□□ 0.24
ACTB-207ENST00000462494 NETO1Q8TDF5 533 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 GFM2Q969S9 779 aaKnown RBP16.53■□□□□ 0.24
ACTB-207ENST00000462494 HSPBAP1Q96EW2 488 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 INPP5KQ9BT40 448 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 SLC29A3Q9BZD2 475 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 ABCB8Q9NUT2 735 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 KIAA1522Q9P206 1035 aaPredicted RBP16.53■□□□□ 0.24
ACTB-207ENST00000462494 HECAQ9UBI9 543 aaPredicted RBP16.53■□□□□ 0.24
ACTB-207ENST00000462494 U3KQV3 271 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 SCN8AQ9UQD0 1980 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 KRT87PA6NCN2 255 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 HS6ST1O60243 411 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 HPRP00739 348 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 URODP06132 367 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 PIGAP37287 484 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 B4GALNT1Q00973 533 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 VAC14Q08AM6 782 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 RAB33AQ14088 237 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 C16orf72Q14CZ0 275 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 BROXQ5VW32 411 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 TTC23Q5W5X9 447 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 DHRS4L2Q6PKH6 230 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 R3HCC1LQ7Z5L2 792 aaKnown RBP16.53■□□□□ 0.24
ACTB-207ENST00000462494 SLC22A15Q8IZD6 547 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 SGCDQ92629 289 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 MBOAT4Q96T53 435 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 BEGAINQ9BUH8 593 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 OSBPL10Q9BXB5 764 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 PAIP1Q9H074 479 aaKnown RBP16.53■□□□□ 0.24
ACTB-207ENST00000462494 IL21Q9HBE4 155 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 CD84Q9UIB8 345 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 INTS6Q9UL03 887 aaKnown RBP16.53■□□□□ 0.24
ACTB-207ENST00000462494 PCDHGA8Q9Y5G5 932 aa16.53■□□□□ 0.24
ACTB-207ENST00000462494 CBSLP0DN79 551 aa16.52■□□□□ 0.24
ACTB-207ENST00000462494 MATN1P21941 496 aa16.52■□□□□ 0.24
ACTB-207ENST00000462494 CBSP35520 551 aa16.52■□□□□ 0.24
ACTB-207ENST00000462494 CSNK1DP48730 415 aa16.52■□□□□ 0.24
ACTB-207ENST00000462494 PTSQ03393 145 aa16.52■□□□□ 0.24
ACTB-207ENST00000462494 MEP1AQ16819 746 aa16.52■□□□□ 0.24
ACTB-207ENST00000462494 METTL2BQ6P1Q9 378 aaKnown RBP16.52■□□□□ 0.24
ACTB-207ENST00000462494 RNF165Q6ZSG1 346 aa16.52■□□□□ 0.24
ACTB-207ENST00000462494 TPRG1Q6ZUI0 275 aa16.52■□□□□ 0.24
ACTB-207ENST00000462494 GALNT13Q8IUC8 556 aa16.52■□□□□ 0.24
ACTB-207ENST00000462494 ABTB1Q969K4 478 aaPredicted RBP16.52■□□□□ 0.24
ACTB-207ENST00000462494 AMBRA1Q9C0C7 1298 aa16.52■□□□□ 0.24
ACTB-207ENST00000462494 DCAF13Q9NV06 445 aaKnown RBP16.52■□□□□ 0.24
ACTB-207ENST00000462494 ASIC5Q9NY37 505 aa16.52■□□□□ 0.24
ACTB-207ENST00000462494 MBD1Q9UIS9 605 aaPredicted RBP16.52■□□□□ 0.24
ACTB-207ENST00000462494 PABPN1LA6NDY0 278 aaKnown RBP16.51■□□□□ 0.23
ACTB-207ENST00000462494 HIST1H2AGP0C0S8 130 aaPredicted RBP16.51■□□□□ 0.23
ACTB-207ENST00000462494 SRCP12931 536 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 GJA1P17302 382 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 HIST1H2ADP20671 130 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 TACR1P25103 407 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 SNRPD1P62314 119 aaKnown RBP16.51■□□□□ 0.23
ACTB-207ENST00000462494 BOP1Q14137 746 aaKnown RBP16.51■□□□□ 0.23
ACTB-207ENST00000462494 MPPE1Q53F39 396 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 KLHL35Q6PF15 583 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 USP45Q70EL2 814 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 TMEM179BQ7Z7N9 219 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 GPR149Q86SP6 731 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 ADHFE1Q8IWW8 467 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 FAM217AQ8IXS0 508 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 EID3Q8N140 333 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 TMEM132CQ8N3T6 1108 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 TERB1Q8NA31 727 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 SCRN2Q96FV2 425 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 HIST1H2AHQ96KK5 128 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 ZNF558Q96NG5 402 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 DOK1Q99704 481 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 HIST1H2AJQ99878 128 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 RBM4BQ9BQ04 359 aaKnown RBP16.51■□□□□ 0.23
ACTB-207ENST00000462494 H2AFJQ9BTM1 129 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 RBM4Q9BWF3 364 aaKnown RBP16.51■□□□□ 0.23
ACTB-207ENST00000462494 ZDHHC6Q9H6R6 413 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 PLGRKTQ9HBL7 147 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 CDH7Q9ULB5 785 aa16.51■□□□□ 0.23
ACTB-207ENST00000462494 SNX6Q9UNH7 406 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms