RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 TLK1Q9UKI8 766 aa11.44□□□□□ -0.58
CPNE1-221ENST00000462352 CLCA2Q9UQC9 943 aa11.44□□□□□ -0.58
CPNE1-221ENST00000462352 PDE10AQ9Y233 779 aa11.44□□□□□ -0.58
CPNE1-221ENST00000462352 ACOT9Q9Y305 439 aa11.44□□□□□ -0.58
CPNE1-221ENST00000462352 SPEGQ15772 3267 aa11.44□□□□□ -0.58
CPNE1-221ENST00000462352 MN1Q10571 1320 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-221ENST00000462352 COL27A1Q8IZC6 1860 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-221ENST00000462352 A0A087X1B8 175 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 A0A096LPK6 155 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 NPEPPSL1A6NEC2 478 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 SMIM23A6NLE4 172 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 MYO1CO00159 1063 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 BTN3A1O00481 513 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 RASGRF2O14827 1237 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 CAPN5O15484 640 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-221ENST00000462352 CDH16O75309 829 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 SYF2O95926 243 aaKnown RBP11.43□□□□□ -0.58
CPNE1-221ENST00000462352 C9P02748 559 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 CD1DP15813 335 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 POLR2CP19387 275 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-221ENST00000462352 MPSTP25325 297 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 GFERP55789 205 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 ATP6V0D1P61421 351 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 PPP1CAP62136 330 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 IRF9Q00978 393 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 IFFO1Q0D2I5 559 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 FOXC1Q12948 553 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 DLG1Q12959 904 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 PRKAA1Q13131 559 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 CSHL1Q14406 222 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 PHKG1Q16816 387 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 TAF1BQ53T94 588 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-221ENST00000462352 ARMC6Q6NXE6 501 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 IRGCQ6NXR0 463 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 TMPRSS7Q7RTY8 843 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 CCDC91Q7Z6B0 441 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 B3GNT8Q7Z7M8 397 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 TBC1D1Q86TI0 1168 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-221ENST00000462352 TMPRSS12Q86WS5 348 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 PLXDC1Q8IUK5 500 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 SLITRK4Q8IW52 837 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 ADGRF3Q8IZF5 1079 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 CENPLQ8N0S6 344 aaPredicted RBP11.43□□□□□ -0.58
CPNE1-221ENST00000462352 CACTIN-AS1Q8N1I8 211 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 RAB42Q8N4Z0 105 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 DCBLD1Q8N8Z6 715 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 LMNTD1Q8N9Z9 388 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 LINC01555Q8NAE3 123 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 OR4D9Q8NGE8 314 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 OR2L8Q8NGY9 312 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 MCOLN3Q8TDD5 553 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 DENND1AQ8TEH3 1009 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 MTBPQ96DY7 904 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 DEPDC7Q96QD5 511 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 PKP4Q99569 1192 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 RAB11FIP5Q9BXF6 653 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 RAB33BQ9H082 229 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 SEMA6CQ9H3T2 930 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 PARVBQ9HBI1 364 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 EURLQ9NYK6 297 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 OR6C2Q9NZP2 312 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 EPHA6Q9UF33 1036 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 PLAAQ9Y263 795 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 UNC13CQ8NB66 2214 aa11.43□□□□□ -0.58
CPNE1-221ENST00000462352 IGHV5-10-1A0A0J9YXX1 117 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 PIPSLA2A3N6 862 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 GSAPA4D1B5 854 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 HYAL3O43820 417 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-221ENST00000462352 CSO75390 466 aaKnown RBP11.42□□□□□ -0.58
CPNE1-221ENST00000462352 RFPL1O75677 317 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 TOP3BO95985 862 aaKnown RBP11.42□□□□□ -0.58
CPNE1-221ENST00000462352 MPOP05164 745 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 CHRM5P08912 532 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-221ENST00000462352 ENO2P09104 434 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-221ENST00000462352 LTA4HP09960 611 aaKnown RBP11.42□□□□□ -0.58
CPNE1-221ENST00000462352 HIST1H2AGP0C0S8 130 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-221ENST00000462352 THRAP10827 490 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 JUPP14923 745 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 HIST1H2ADP20671 130 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 INHBCP55103 352 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 ZFP36L1Q07352 338 aaKnown RBP11.42□□□□□ -0.58
CPNE1-221ENST00000462352 RASA2Q15283 850 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 TSNQ15631 228 aaKnown RBP11.42□□□□□ -0.58
CPNE1-221ENST00000462352 PPP1R3AQ16821 1122 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 ISXQ2M1V0 245 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 SNAP47Q5SQN1 464 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 BEND6Q5SZJ8 279 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-221ENST00000462352 ANKS6Q68DC2 871 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 SBSNQ6UWP8 590 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 TIFABQ6ZNK6 161 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 ADAMTSL2Q86TH1 951 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 CNPY4Q8N129 248 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 GALNT15Q8N3T1 639 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 C2orf73Q8N5S3 287 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-221ENST00000462352 MZB1Q8WU39 189 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 ZNF480Q8WV37 535 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 KCTD4Q8WVF5 259 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 HNRNPLLQ8WVV9 542 aaKnown RBP11.42□□□□□ -0.58
CPNE1-221ENST00000462352 PTERQ96BW5 349 aa11.42□□□□□ -0.58
CPNE1-221ENST00000462352 NXNL1Q96CM4 212 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms