RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 MAT1AQ00266 395 aaKnown RBP2.86□□□□□ -1.95
HDAC6-212ENST00000461608 E2F5Q15329 346 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 NPTX1Q15818 432 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 MEP1BQ16820 701 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 ZNF789Q5FWF6 425 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 LRRC73Q5JTD7 316 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 SIRPB2Q5JXA9 342 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 C9orf57Q5W0N0 161 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 FAM171BQ6P995 826 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 ZNF517Q6ZMY9 492 aaPredicted RBP2.86□□□□□ -1.95
HDAC6-212ENST00000461608 DGLUCYQ7Z3D6 616 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 SATL1Q86VE3 508 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 UNC45BQ8IWX7 931 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 CFAP206Q8IYR0 622 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 NDUFAF2Q8N183 169 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 NUP93Q8N1F7 819 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 SIX6OS1Q8N1H7 587 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 ZNF441Q8N8Z8 693 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 RASGEF1AQ8N9B8 481 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 SLC4A11Q8NBS3 891 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 OR2T12Q8NG77 320 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 GRAPLQ8TC17 118 aaPredicted RBP2.86□□□□□ -1.95
HDAC6-212ENST00000461608 SLC26A7Q8TE54 656 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 GRK7Q8WTQ7 553 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 KCNE4Q8WWG9 221 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 OTUB1Q96FW1 271 aaPredicted RBP2.86□□□□□ -1.95
HDAC6-212ENST00000461608 MARK4Q96L34 752 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 MYADMQ96S97 322 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 ZPBPQ9BS86 351 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 PRRG4Q9BZD6 226 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 ZBTB20Q9HC78 741 aaPredicted RBP2.86□□□□□ -1.95
HDAC6-212ENST00000461608 TRPC7Q9HCX4 862 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 ACKR4Q9NPB9 350 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 MYNNQ9NPC7 610 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 SERINC1Q9NRX5 453 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 VPS18Q9P253 973 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 TXNDC16Q9P2K2 825 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 RALYQ9UKM9 306 aaKnown RBP2.86□□□□□ -1.95
HDAC6-212ENST00000461608 KCNS2Q9ULS6 477 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 SLC7A7Q9UM01 511 aa2.86□□□□□ -1.95
HDAC6-212ENST00000461608 IGLV5-45A0A087WSX0 123 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 TRAV24A0A0B4J272 114 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 YDJCA8MPS7 323 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 E9PI62 339 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 PAPSS2O95340 614 aaPredicted RBP2.85□□□□□ -1.95
HDAC6-212ENST00000461608 BAG4O95429 457 aaKnown RBP2.85□□□□□ -1.95
HDAC6-212ENST00000461608 TGDSO95455 350 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 ZBTB11O95625 1053 aaPredicted RBP2.85□□□□□ -1.95
HDAC6-212ENST00000461608 SPP1P10451 314 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 FGF3P11487 239 aaPredicted RBP2.85□□□□□ -1.95
HDAC6-212ENST00000461608 FGF5P12034 268 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 ATP6V1B1P15313 513 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 FMO5P49326 533 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 FUT6P51993 359 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 MFAP3P55082 362 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 FOXG1P55316 489 aaPredicted RBP2.85□□□□□ -1.95
HDAC6-212ENST00000461608 TPD52P55327 224 aaPredicted RBP2.85□□□□□ -1.95
HDAC6-212ENST00000461608 LINC00205P59089 165 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 POLR2LP62875 67 aaKnown RBP2.85□□□□□ -1.95
HDAC6-212ENST00000461608 RRS1Q15050 365 aaKnown RBP2.85□□□□□ -1.95
HDAC6-212ENST00000461608 IZUMO4Q1ZYL8 232 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 ODF4Q2M2E3 257 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 PDLIM3Q53GG5 364 aaPredicted RBP2.85□□□□□ -1.95
HDAC6-212ENST00000461608 NHSL2Q5HYW2 709 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 TXNRD3NBQ6F5E7 133 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 LINC00696Q6ZRV3 163 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 OTOAQ7RTW8 1153 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 C16orf82Q7Z2V1 217 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 PIWIL4Q7Z3Z4 852 aaKnown RBP2.85□□□□□ -1.95
HDAC6-212ENST00000461608 ZNF554Q86TJ5 538 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 NFE4Q86UQ8 179 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 AMIGO1Q86WK6 493 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 FAM114A1Q8IWE2 563 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 KLHL7Q8IXQ5 586 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 SMRP1Q8NCR6 262 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 NPEPL1Q8NDH3 523 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 OR5M8Q8NGP6 311 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 PSMA8Q8TAA3 256 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 ZNF473Q8WTR7 871 aaKnown RBP2.85□□□□□ -1.95
HDAC6-212ENST00000461608 SEPT1Q8WYJ6 367 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 RAD54LQ92698 747 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 TEKT1Q969V4 418 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 INTS14Q96SY0 518 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 WACQ9BTA9 647 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 POLR3CQ9BUI4 534 aaPredicted RBP2.85□□□□□ -1.95
HDAC6-212ENST00000461608 GTPBP2Q9BX10 602 aaKnown RBP2.85□□□□□ -1.95
HDAC6-212ENST00000461608 FAM129AQ9BZQ8 928 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 CSTL1Q9H114 145 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 LMAN1LQ9HAT1 526 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 TUFT1Q9NNX1 390 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 IL1RAPL2Q9NP60 686 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 ABCB8Q9NUT2 735 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 SLC38A7Q9NVC3 462 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 CHCHD3Q9NX63 227 aaKnown RBP2.85□□□□□ -1.95
HDAC6-212ENST00000461608 COQ3Q9NZJ6 369 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 MTRRQ9UBK8 725 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 ZDHHC2Q9UIJ5 367 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 ZNF580Q9UK33 172 aa2.85□□□□□ -1.95
HDAC6-212ENST00000461608 ITGA11Q9UKX5 1188 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms