RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 CPSF2Q9P2I0 782 aaKnown RBP3.92□□□□□ -1.78
UBA3-204ENST00000461522 GTF3C4Q9UKN8 822 aa3.92□□□□□ -1.78
UBA3-204ENST00000461522 CYP46A1Q9Y6A2 500 aa3.92□□□□□ -1.78
UBA3-204ENST00000461522 CAPN7Q9Y6W3 813 aa3.92□□□□□ -1.78
UBA3-204ENST00000461522 UTRNP46939 3433 aa3.92□□□□□ -1.78
UBA3-204ENST00000461522 AFDNP55196 1824 aaKnown RBP3.92□□□□□ -1.78
UBA3-204ENST00000461522 RFX7Q2KHR2 1363 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 RPAP1Q9BWH6 1393 aaPredicted RBP3.91□□□□□ -1.78
UBA3-204ENST00000461522 FAM237AA0A1B0GTK4 181 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 A0A1W2PP11 408 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 SYNDIG1LA6NDD5 238 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 TSPY2A6NKD2 308 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 PSMD14O00487 310 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 HS3ST1O14792 307 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 NCAM2O15394 837 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 FRAT2O75474 233 aaPredicted RBP3.91□□□□□ -1.78
UBA3-204ENST00000461522 MBD4O95243 580 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 BAG3O95817 575 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 TSPY3P0CV98 308 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 TSPY8P0CW00 308 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 ZNF182P17025 639 aaPredicted RBP3.91□□□□□ -1.78
UBA3-204ENST00000461522 DESP17661 470 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 UGT1A1P22309 533 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 UBA1P22314 1058 aaKnown RBP3.91□□□□□ -1.78
UBA3-204ENST00000461522 IL4RP24394 825 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 ABCD3P28288 659 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 ADORA1P30542 326 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 CTCFP49711 727 aaPredicted RBP3.91□□□□□ -1.78
UBA3-204ENST00000461522 EIF3BP55884 814 aaKnown RBP3.91□□□□□ -1.78
UBA3-204ENST00000461522 HSD17B7P56937 341 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 GNB1P62873 340 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 TSPY1Q01534 308 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 COX10Q12887 443 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 MAD2L1Q13257 205 aaPredicted RBP3.91□□□□□ -1.78
UBA3-204ENST00000461522 PSMD6Q15008 389 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 KRTCAP3Q53RY4 240 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 ARMC4Q5T2S8 1044 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 SPATA1Q5VX52 437 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 LCN10Q6JVE6 187 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 PAPD4Q6PIY7 484 aaKnown RBP3.91□□□□□ -1.78
UBA3-204ENST00000461522 UNC5DQ6UXZ4 953 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 PLEKHM3Q6ZWE6 761 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 NOTCH2NLQ7Z3S9 236 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 SDCCAG8Q86SQ7 713 aaPredicted RBP3.91□□□□□ -1.78
UBA3-204ENST00000461522 DDX60Q8IY21 1712 aaKnown RBP3.91□□□□□ -1.78
UBA3-204ENST00000461522 ADSSL1Q8N142 457 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 ANKRD31Q8N7Z5 1873 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 STPG4Q8N801 248 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 LSMEM1Q8N8F7 131 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 ADAD2Q8NCV1 583 aaKnown RBP3.91□□□□□ -1.78
UBA3-204ENST00000461522 SNX21Q969T3 373 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 SAAL1Q96ER3 474 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 RRNAD1Q96FB5 475 aaKnown RBP3.91□□□□□ -1.78
UBA3-204ENST00000461522 ZBED3Q96IU2 234 aaPredicted RBP3.91□□□□□ -1.78
UBA3-204ENST00000461522 NUDT16L1Q9BRJ7 211 aaKnown RBP3.91□□□□□ -1.78
UBA3-204ENST00000461522 FSD1Q9BTV5 496 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 IDI2Q9BXS1 227 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 TCP11L1Q9NUJ3 509 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 PAG1Q9NWQ8 432 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 PCSK1NQ9UHG2 260 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 GJD2Q9UKL4 321 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 LAMB2P55268 1798 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 GAKO14976 1311 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 KDM3AQ9Y4C1 1321 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 SLX4Q8IY92 1834 aa3.91□□□□□ -1.78
UBA3-204ENST00000461522 LRRC37AA6NMS7 1700 aa3.9□□□□□ -1.78
UBA3-204ENST00000461522 OR5K3A6NET4 321 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 C5orf60A6NFR6 353 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 RRN3P2A6NIE6 340 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 BOLA2-SMG1P6H3BVE0 249 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 M0QZ24 198 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 ANKRD28O15084 1053 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 IPO7O95373 1038 aaKnown RBP3.9□□□□□ -1.79
UBA3-204ENST00000461522 BAG4O95429 457 aaKnown RBP3.9□□□□□ -1.79
UBA3-204ENST00000461522 ERVK-10P10266 1014 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 CSF2RAP15509 400 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 CAPN3P20807 821 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 COG7P83436 770 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 MRPL28Q13084 256 aaKnown RBP3.9□□□□□ -1.79
UBA3-204ENST00000461522 ALX1Q15699 326 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 TECRLQ5HYJ1 363 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 INTS11Q5TA45 600 aaKnown RBP3.9□□□□□ -1.79
UBA3-204ENST00000461522 ZC2HC1BQ5TFG8 222 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 APOBEC3HQ6NTF7 200 aaKnown RBP3.9□□□□□ -1.79
UBA3-204ENST00000461522 PLBD1Q6P4A8 553 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 CTR9Q6PD62 1173 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 INO80CQ6PI98 192 aaPredicted RBP3.9□□□□□ -1.79
UBA3-204ENST00000461522 TMCO3Q6UWJ1 677 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 TBC1D1Q86TI0 1168 aaPredicted RBP3.9□□□□□ -1.79
UBA3-204ENST00000461522 CEP57L1Q8IYX8 460 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 CNTROBQ8N137 903 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 CERS5Q8N5B7 392 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 GSDMBQ8TAX9 411 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 FCAMRQ8WWV6 532 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 TMEM190Q8WZ59 177 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 ST8SIA4Q92187 359 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 HDAC2Q92769 488 aaKnown RBP3.9□□□□□ -1.79
UBA3-204ENST00000461522 TEKT1Q969V4 418 aa3.9□□□□□ -1.79
UBA3-204ENST00000461522 NSUN4Q96CB9 384 aaKnown RBP3.9□□□□□ -1.79
UBA3-204ENST00000461522 ARHGEF26Q96DR7 871 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms