RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ACADVLP49748 655 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 PTPN5P54829 565 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 HSPB3Q12988 150 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 QPRTQ15274 297 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 RNF44Q7L0R7 432 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 FAM124AQ86V42 546 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 DCAF4L2Q8NA75 395 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 CLIP3Q96DZ5 547 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 OR2AG1Q9H205 316 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 DNAJC25-GNG10A0A024R161 153 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 PSMD11O00231 422 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 GNRH1P01148 92 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 EDN1P05305 212 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 CBSLP0DN79 551 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 CBSP35520 551 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 RING1Q06587 406 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 ZSWIM7Q19AV6 140 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 ZBED5Q49AG3 693 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 UBXN11Q5T124 520 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 KLHDC10Q6PID8 442 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 TPRG1Q6ZUI0 275 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 CEP97Q8IW35 865 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 COX4I2Q96KJ9 171 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 ZNF347Q96SE7 839 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 TTLL2Q9BWV7 592 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 KAT8Q9H7Z6 458 aaKnown RBP14.46□□□□□ -0.09
PTPRU-205ENST00000460170 ITGB1BP2Q9UKP3 347 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 SLC22A14Q9Y267 594 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 WNT9AO14904 365 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 MTX2O75431 263 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 POU2F1P14859 743 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 UXS1Q8NBZ7 420 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 TMEM40Q8WWA1 233 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 CAPSLQ8WWF8 208 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 AUTS2Q8WXX7 1259 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 SLC38A4Q969I6 547 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 VMP1Q96GC9 406 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 PSKH2Q96QS6 385 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 MAT2BQ9NZL9 334 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 ERVW-1Q9UQF0 538 aa14.46□□□□□ -0.09
PTPRU-205ENST00000460170 PTGESO14684 152 aa14.46□□□□□ -0.1
PTPRU-205ENST00000460170 PGRP06401 933 aa14.46□□□□□ -0.1
PTPRU-205ENST00000460170 ZBTB6Q15916 424 aa14.46□□□□□ -0.1
PTPRU-205ENST00000460170 SPATS1Q496A3 300 aa14.46□□□□□ -0.1
PTPRU-205ENST00000460170 GPR153Q6NV75 609 aa14.46□□□□□ -0.1
PTPRU-205ENST00000460170 ADGRG6Q86SQ4 1221 aa14.46□□□□□ -0.1
PTPRU-205ENST00000460170 GALNT13Q8IUC8 556 aa14.46□□□□□ -0.1
PTPRU-205ENST00000460170 BIRC7Q96CA5 298 aa14.46□□□□□ -0.1
PTPRU-205ENST00000460170 CHCHD6Q9BRQ6 235 aa14.46□□□□□ -0.1
PTPRU-205ENST00000460170 COPS4Q9BT78 406 aa14.46□□□□□ -0.1
PTPRU-205ENST00000460170 EFCAB11Q9BUY7 163 aa14.46□□□□□ -0.1
PTPRU-205ENST00000460170 MSRAQ9UJ68 235 aa14.46□□□□□ -0.1
PTPRU-205ENST00000460170 GADD45GO95257 159 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 MYL9P24844 172 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 OR4F3Q6IEY1 312 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 GET4Q7L5D6 327 aaPredicted RBP14.45□□□□□ -0.1
PTPRU-205ENST00000460170 ERI1Q8IV48 349 aaKnown RBP14.45□□□□□ -0.1
PTPRU-205ENST00000460170 TSPEARQ8WU66 669 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 SLC22A17Q8WUG5 538 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 ZUFSPQ96AP4 578 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 PAAF1Q9BRP4 392 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 POLR1DQ9Y2S0 133 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 ZNF99A8MXY4 864 aaPredicted RBP14.45□□□□□ -0.1
PTPRU-205ENST00000460170 MANBAO00462 879 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 DHRS4L1P0CG22 281 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 GMPRP36959 345 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 ETV4P43268 484 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 DIO3P55073 304 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 PDCD4Q53EL6 469 aaKnown RBP14.45□□□□□ -0.1
PTPRU-205ENST00000460170 RBM48Q5RL73 367 aaKnown RBP14.45□□□□□ -0.1
PTPRU-205ENST00000460170 BRAT1Q6PJG6 821 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 MOCOSQ96EN8 888 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 RIOK2Q9BVS4 552 aaKnown RBP14.45□□□□□ -0.1
PTPRU-205ENST00000460170 PCBD2Q9H0N5 130 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 MRPS33Q9Y291 106 aaKnown RBP14.45□□□□□ -0.1
PTPRU-205ENST00000460170 AKAP11Q9UKA4 1901 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 CASKO14936 926 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 NPPAP01160 153 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 EBLN1P0CF75 366 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 RGS8P57771 180 aaPredicted RBP14.45□□□□□ -0.1
PTPRU-205ENST00000460170 SRP54P61011 504 aaKnown RBP14.45□□□□□ -0.1
PTPRU-205ENST00000460170 MYLK3Q32MK0 819 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 ATG14Q6ZNE5 492 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 RHEBL1Q8TAI7 183 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 PRICKLE1Q96MT3 831 aaPredicted RBP14.45□□□□□ -0.1
PTPRU-205ENST00000460170 ITM2CQ9NQX7 267 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 PCDHGB3Q9Y5G1 929 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 S1PR4O95977 384 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 ANXA8P13928 327 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 CD1DP15813 335 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 ENGP17813 658 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 PGGT1BP53609 377 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 TLE2Q04725 743 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.45□□□□□ -0.1
PTPRU-205ENST00000460170 ANKRD49Q8WVL7 239 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 H3BSA7 217 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 SNPHO15079 494 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 TNFRSF21O75509 655 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 HLA-DQA2P01906 255 aa14.45□□□□□ -0.1
PTPRU-205ENST00000460170 ATP1B2P14415 290 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms