RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 PROKR1Q8TCW9 393 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 ASZ1Q8WWH4 475 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 CARD6Q9BX69 1037 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 CATSPERZQ9NTU4 200 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 ANAPC5Q9UJX4 755 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 G3BP2Q9UN86 482 aaKnown RBP21.98■■□□□ 1.11
PTPN4-207ENST00000460162 SRPK3Q9UPE1 567 aa21.98■■□□□ 1.11
PTPN4-207ENST00000460162 APOA4P06727 396 aa21.97■■□□□ 1.11
PTPN4-207ENST00000460162 PEBP1P30086 187 aaKnown RBP21.97■■□□□ 1.11
PTPN4-207ENST00000460162 TTPAP49638 278 aa21.97■■□□□ 1.11
PTPN4-207ENST00000460162 CCL11P51671 97 aa21.97■■□□□ 1.11
PTPN4-207ENST00000460162 HSPA14Q0VDF9 509 aa21.97■■□□□ 1.11
PTPN4-207ENST00000460162 CCNG2Q16589 344 aa21.97■■□□□ 1.11
PTPN4-207ENST00000460162 PCID2Q5JVF3 399 aa21.97■■□□□ 1.11
PTPN4-207ENST00000460162 MED25Q71SY5 747 aa21.97■■□□□ 1.11
PTPN4-207ENST00000460162 RAB43Q86YS6 212 aa21.97■■□□□ 1.11
PTPN4-207ENST00000460162 DCUN1D3Q8IWE4 304 aa21.97■■□□□ 1.11
PTPN4-207ENST00000460162 TMEM102Q8N9M5 508 aaPredicted RBP21.97■■□□□ 1.11
PTPN4-207ENST00000460162 PLAGL1Q9UM63 463 aa21.97■■□□□ 1.11
PTPN4-207ENST00000460162 CDYLQ9Y232 598 aa21.97■■□□□ 1.11
PTPN4-207ENST00000460162 ZKSCAN5Q9Y2L8 839 aa21.97■■□□□ 1.11
PTPN4-207ENST00000460162 CLEC18AA5D8T8 446 aa21.96■■□□□ 1.11
PTPN4-207ENST00000460162 ISM1B1AKI9 464 aa21.96■■□□□ 1.11
PTPN4-207ENST00000460162 PRMT5O14744 637 aaPredicted RBP21.96■■□□□ 1.11
PTPN4-207ENST00000460162 ZSCAN9O15535 394 aaPredicted RBP21.96■■□□□ 1.11
PTPN4-207ENST00000460162 GPC4O75487 556 aa21.96■■□□□ 1.11
PTPN4-207ENST00000460162 RRADP55042 308 aa21.96■■□□□ 1.11
PTPN4-207ENST00000460162 CSE1LP55060 971 aaKnown RBP21.96■■□□□ 1.11
PTPN4-207ENST00000460162 MLLT10P55197 1068 aa21.96■■□□□ 1.11
PTPN4-207ENST00000460162 TMED2Q15363 201 aa21.96■■□□□ 1.11
PTPN4-207ENST00000460162 SIX1Q15475 284 aaPredicted RBP21.96■■□□□ 1.11
PTPN4-207ENST00000460162 FAM69BQ5VUD6 431 aa21.96■■□□□ 1.11
PTPN4-207ENST00000460162 TLDC1Q6P9B6 456 aa21.96■■□□□ 1.11
PTPN4-207ENST00000460162 CLEC18BQ6UXF7 455 aa21.96■■□□□ 1.11
PTPN4-207ENST00000460162 UNC5DQ6UXZ4 953 aa21.96■■□□□ 1.11
PTPN4-207ENST00000460162 C4orf22Q6V702 233 aa21.96■■□□□ 1.11
PTPN4-207ENST00000460162 CLEC18CQ8NCF0 446 aa21.96■■□□□ 1.11
PTPN4-207ENST00000460162 LKAAEAR1Q8TD35 194 aa21.96■■□□□ 1.11
PTPN4-207ENST00000460162 ZNF451Q9Y4E5 1061 aa21.96■■□□□ 1.11
PTPN4-207ENST00000460162 PCSK5Q92824 1860 aa21.95■■□□□ 1.1
PTPN4-207ENST00000460162 AP3B1O00203 1094 aa21.95■■□□□ 1.1
PTPN4-207ENST00000460162 RPL22P35268 128 aaKnown RBP21.95■■□□□ 1.1
PTPN4-207ENST00000460162 UBAP2LQ14157 1087 aaKnown RBP21.95■■□□□ 1.1
PTPN4-207ENST00000460162 KYNUQ16719 465 aa21.95■■□□□ 1.1
PTPN4-207ENST00000460162 HPS6Q86YV9 775 aa21.95■■□□□ 1.1
PTPN4-207ENST00000460162 VRK3Q8IV63 474 aa21.95■■□□□ 1.1
PTPN4-207ENST00000460162 MPP5Q8N3R9 675 aa21.95■■□□□ 1.1
PTPN4-207ENST00000460162 ZBTB2Q8N680 514 aa21.95■■□□□ 1.1
PTPN4-207ENST00000460162 SLC22A18Q96BI1 424 aa21.95■■□□□ 1.1
PTPN4-207ENST00000460162 GBP5Q96PP8 586 aa21.95■■□□□ 1.1
PTPN4-207ENST00000460162 MENTQ9BUN1 341 aa21.95■■□□□ 1.1
PTPN4-207ENST00000460162 IL22Q9GZX6 179 aa21.95■■□□□ 1.1
PTPN4-207ENST00000460162 TREX1Q9NSU2 369 aa21.95■■□□□ 1.1
PTPN4-207ENST00000460162 PLCL2Q9UPR0 1127 aa21.95■■□□□ 1.1
PTPN4-207ENST00000460162 HCRTR1O43613 425 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 SLCO2B1O94956 709 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 CD63P08962 238 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 ZSCAN5DPP0CG00 497 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 ATP1A4Q13733 1029 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 ZNF662Q6ZS27 426 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 DNAJC22Q8N4W6 341 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 LINC01555Q8NAE3 123 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 MAIP1Q8WWC4 291 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 IP6K3Q96PC2 410 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 PANX3Q96QZ0 392 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 RAB11FIP5Q9BXF6 653 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 CHRAC1Q9NRG0 131 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 TXLNGQ9NUQ3 528 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 MARCH4Q9P2E8 410 aaPredicted RBP21.94■■□□□ 1.1
PTPN4-207ENST00000460162 ANKMY1Q9P2S6 941 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 GPN3Q9UHW5 284 aaPredicted RBP21.94■■□□□ 1.1
PTPN4-207ENST00000460162 GNPTGQ9UJJ9 305 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 DRG1Q9Y295 367 aaKnown RBP21.94■■□□□ 1.1
PTPN4-207ENST00000460162 NUP210LQ5VU65 1888 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 PCM1Q15154 2024 aa21.94■■□□□ 1.1
PTPN4-207ENST00000460162 IQCF5A8MTL0 148 aa21.93■■□□□ 1.1
PTPN4-207ENST00000460162 CD3EAPO15446 510 aaKnown RBP21.93■■□□□ 1.1
PTPN4-207ENST00000460162 KLF7O75840 302 aaPredicted RBP21.93■■□□□ 1.1
PTPN4-207ENST00000460162 SORBS2O94875 1100 aaKnown RBP21.93■■□□□ 1.1
PTPN4-207ENST00000460162 S1PR4O95977 384 aa21.93■■□□□ 1.1
PTPN4-207ENST00000460162 CBSLP0DN79 551 aa21.93■■□□□ 1.1
PTPN4-207ENST00000460162 MAGP20916 626 aa21.93■■□□□ 1.1
PTPN4-207ENST00000460162 CD9P21926 228 aa21.93■■□□□ 1.1
PTPN4-207ENST00000460162 AOAHP28039 575 aa21.93■■□□□ 1.1
PTPN4-207ENST00000460162 CBSP35520 551 aa21.93■■□□□ 1.1
PTPN4-207ENST00000460162 SESN2P58004 480 aaPredicted RBP21.93■■□□□ 1.1
PTPN4-207ENST00000460162 BASP1P80723 227 aaKnown RBP21.93■■□□□ 1.1
PTPN4-207ENST00000460162 MRGPREQ86SM8 312 aa21.93■■□□□ 1.1
PTPN4-207ENST00000460162 LRRC6Q86X45 466 aa21.93■■□□□ 1.1
PTPN4-207ENST00000460162 SPRTNQ9H040 489 aaPredicted RBP21.93■■□□□ 1.1
PTPN4-207ENST00000460162 P2RY12Q9H244 342 aa21.93■■□□□ 1.1
PTPN4-207ENST00000460162 IRAK4Q9NWZ3 460 aa21.93■■□□□ 1.1
PTPN4-207ENST00000460162 NDOR1Q9UHB4 597 aa21.93■■□□□ 1.1
PTPN4-207ENST00000460162 TTLL8A6PVC2 850 aa21.92■■□□□ 1.1
PTPN4-207ENST00000460162 KPNA5O15131 536 aa21.92■■□□□ 1.1
PTPN4-207ENST00000460162 DPM1O60762 260 aa21.92■■□□□ 1.1
PTPN4-207ENST00000460162 RPS3P23396 243 aaKnown RBP eCLIP21.92■■□□□ 1.1
PTPN4-207ENST00000460162 FOLR3P41439 243 aa21.92■■□□□ 1.1
PTPN4-207ENST00000460162 DCDP81605 110 aaKnown RBP21.92■■□□□ 1.1
PTPN4-207ENST00000460162 GRB7Q14451 532 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms