RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 ADNPQ9H2P0 1102 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 INTS10Q9NVR2 710 aaKnown RBP15.58■□□□□ 0.08
COL7A1-203ENST00000459756 PCYOX1Q9UHG3 505 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 SERTAD3Q9UJW9 196 aa15.58■□□□□ 0.08
COL7A1-203ENST00000459756 MRPS18BQ9Y676 258 aaKnown RBP15.58■□□□□ 0.08
COL7A1-203ENST00000459756 A0A0J9YY10 115 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 ISM1B1AKI9 464 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 KATNA1O75449 491 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 RECKO95980 971 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 KLK3P07288 261 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-203ENST00000459756 CYP2A7P20853 494 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 OAS2P29728 719 aaKnown RBP15.57■□□□□ 0.08
COL7A1-203ENST00000459756 ATP5DP30049 168 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 THOC5Q13769 683 aaKnown RBP15.57■□□□□ 0.08
COL7A1-203ENST00000459756 PTK6Q13882 451 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 GRB7Q14451 532 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 SLC5A12Q1EHB4 618 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 RNASEH2BQ5TBB1 312 aaKnown RBP15.57■□□□□ 0.08
COL7A1-203ENST00000459756 PAPD7Q5XG87 772 aaKnown RBP15.57■□□□□ 0.08
COL7A1-203ENST00000459756 ZNF470Q6ECI4 717 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 C16orf46Q6P387 395 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 ZNF517Q6ZMY9 492 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-203ENST00000459756 CDHR3Q6ZTQ4 885 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 CENPUQ71F23 418 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 TRIM73Q86UV7 250 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 LMNTD2Q8IXW0 634 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 SLC38A9Q8NBW4 561 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 OR1L3Q8NH93 324 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 SKA2Q8WVK7 121 aaPredicted RBP15.57■□□□□ 0.08
COL7A1-203ENST00000459756 RAD51AP1Q96B01 352 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 SIGLEC10Q96LC7 697 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 TRIM56Q9BRZ2 755 aaKnown RBP15.57■□□□□ 0.08
COL7A1-203ENST00000459756 MENTQ9BUN1 341 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 RAB11FIP5Q9BXF6 653 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 FAM117AQ9C073 453 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 GEMIN8Q9NWZ8 242 aaKnown RBP15.57■□□□□ 0.08
COL7A1-203ENST00000459756 ASIC3Q9UHC3 531 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 CRYL1Q9Y2S2 319 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 MAD1L1Q9Y6D9 718 aa15.57■□□□□ 0.08
COL7A1-203ENST00000459756 ZNF462Q96JM2 2506 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 ZCWPW2A0A1B0GU75 182 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 NIPSNAP2O75323 286 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 CREG1O75629 220 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 USP1O94782 785 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 S1PR4O95977 384 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 PKMP14618 531 aaKnown RBP15.56■□□□□ 0.08
COL7A1-203ENST00000459756 CD9P21926 228 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 CCNFP41002 786 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 ITGA1P56199 1179 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 POLE2P56282 527 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 GPS2Q13227 327 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 LONRF1Q17RB8 773 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 ZNF789Q5FWF6 425 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 PCGF5Q86SE9 256 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 ZNF605Q86T29 641 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 GPR135Q8IZ08 494 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 RAB42Q8N4Z0 105 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 OR2L8Q8NGY9 312 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 SEC14L1Q92503 715 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 N4BP2L2Q92802 583 aaPredicted RBP15.56■□□□□ 0.08
COL7A1-203ENST00000459756 MR1Q95460 341 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 SLC22A18Q96BI1 424 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 FOPNLQ96NB1 174 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 NAPGQ99747 312 aaPredicted RBP15.56■□□□□ 0.08
COL7A1-203ENST00000459756 AKIRIN1Q9H9L7 192 aaPredicted RBP15.56■□□□□ 0.08
COL7A1-203ENST00000459756 TUBD1Q9UJT1 453 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 SLC39A10Q9ULF5 831 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 BAHCC1Q9P281 2608 aa15.56■□□□□ 0.08
COL7A1-203ENST00000459756 GCN1Q92616 2671 aaKnown RBP15.55■□□□□ 0.08
COL7A1-203ENST00000459756 CTAGE9A4FU28 777 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 B8ZZF3 427 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 E5RI56 91 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 E7EQ34 232 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 MEN1O00255 615 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 DNALI1O14645 258 aaPredicted RBP15.55■□□□□ 0.08
COL7A1-203ENST00000459756 RASGRF2O14827 1237 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 C1orf105O95561 183 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 HBQ1P09105 142 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 CHRM3P20309 590 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 PEBP1P30086 187 aaKnown RBP15.55■□□□□ 0.08
COL7A1-203ENST00000459756 RPS15P62841 145 aaKnown RBP15.55■□□□□ 0.08
COL7A1-203ENST00000459756 ERV3-1Q14264 604 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 GBX1Q14549 363 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 ZIC1Q15915 447 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 DEFB109BQ30KR1 87 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 ATP1A1-AS1Q5TC04 95 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 IZUMO3Q5VZ72 239 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 FAM199XQ6PEV8 388 aaPredicted RBP15.55■□□□□ 0.08
COL7A1-203ENST00000459756 SYDE1Q6ZW31 735 aaPredicted RBP15.55■□□□□ 0.08
COL7A1-203ENST00000459756 CREG2Q8IUH2 290 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 DSELQ8IZU8 1212 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 AGGF1Q8N302 714 aaeCLIP15.55■□□□□ 0.08
COL7A1-203ENST00000459756 ZBTB2Q8N680 514 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 LINC01555Q8NAE3 123 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 CALML6Q8TD86 181 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 MAGEC3Q8TD91 643 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 APOBEC4Q8WW27 367 aaKnown RBP15.55■□□□□ 0.08
COL7A1-203ENST00000459756 CLIP3Q96DZ5 547 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 CAPZA3Q96KX2 299 aa15.55■□□□□ 0.08
COL7A1-203ENST00000459756 RUNDC3BQ96NL0 473 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms