RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 ITIH1P19827 911 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 CTSOP43234 321 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 SEPHS1P49903 392 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 SEMA5AQ13591 1074 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 CCINQ13939 588 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 C1orf220Q5T0J3 134 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 SLC36A4Q6YBV0 504 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 LMX1AQ8TE12 382 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 OR52E6Q96RD3 313 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 KXD1Q9BQD3 176 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 EFCAB11Q9BUY7 163 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 RNF38Q9H0F5 515 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 MAT2BQ9NZL9 334 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 SNX10Q9Y5X0 201 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 RGSL1A5PLK6 1076 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 GABBR2O75899 941 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 CTSAP10619 480 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 COX4I1P13073 169 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 GJA1P17302 382 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 LIMK2P53671 638 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 MLLT6P55198 1093 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 CSNK2BP67870 215 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 RING1Q06587 406 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 B3GNT9Q6UX72 402 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 RTL4Q6ZR62 310 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 FAM92BQ6ZTR7 304 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 HIPK1Q86Z02 1210 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 PM20D2Q8IYS1 436 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 CMTM8Q8IZV2 173 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 DEPDC4Q8N2C3 294 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 ZNF276Q8N554 614 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 SMYD1Q8NB12 490 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 AP3S1Q92572 193 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 HDAC2Q92769 488 aaKnown RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 KLK6Q92876 244 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 IGKV6D-21A0A0A0MT36 114 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 LAMP2P13473 410 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 KIR3DL1P43629 444 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 SLC25A3Q00325 362 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 ELOAQ14241 798 aaKnown RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 PQLC1Q8N2U9 271 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 NAT8LQ8N9F0 302 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 DCAKDQ8WVC6 231 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 ZNF641Q96N77 438 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 STRA6Q9BX79 667 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 XYLT2Q9H1B5 865 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 KLHL1Q9NR64 748 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 TBCCD1Q9NVR7 557 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 PSMD13Q9UNM6 376 aa10.53□□□□□ -0.72
AMBRA1-202ENST00000458649 TCEA3O75764 348 aa10.52□□□□□ -0.72
AMBRA1-202ENST00000458649 GOT2P00505 430 aaKnown RBP10.52□□□□□ -0.72
AMBRA1-202ENST00000458649 CPN2P22792 545 aa10.52□□□□□ -0.72
AMBRA1-202ENST00000458649 HNMTP50135 292 aa10.52□□□□□ -0.72
AMBRA1-202ENST00000458649 CLCN2P51788 898 aa10.52□□□□□ -0.72
AMBRA1-202ENST00000458649 BTN3A2P78410 334 aa10.52□□□□□ -0.72
AMBRA1-202ENST00000458649 SLC25A11Q02978 314 aaKnown RBP10.52□□□□□ -0.72
AMBRA1-202ENST00000458649 SLC13A2Q13183 592 aa10.52□□□□□ -0.72
AMBRA1-202ENST00000458649 TPRG1Q6ZUI0 275 aa10.52□□□□□ -0.72
AMBRA1-202ENST00000458649 GALNT7Q86SF2 657 aa10.52□□□□□ -0.72
AMBRA1-202ENST00000458649 FAM47BQ8NA70 645 aa10.52□□□□□ -0.72
AMBRA1-202ENST00000458649 SPHK2Q9NRA0 654 aa10.52□□□□□ -0.72
AMBRA1-202ENST00000458649 SCML1Q9UN30 329 aa10.52□□□□□ -0.72
AMBRA1-202ENST00000458649 SNX7Q9UNH6 387 aa10.52□□□□□ -0.72
AMBRA1-202ENST00000458649 TSPAN6O43657 245 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 OR6B1O95007 311 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 METTL18O95568 372 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 PRPS2P11908 318 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 EPHA3P29320 983 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 CCR8P51685 355 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 PTPN5P54829 565 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 RPS21P63220 83 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 ARF5P84085 180 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 RPL6Q02878 288 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 MS4A13Q5J8X5 152 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 PDSS1Q5T2R2 415 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 PHC2Q8IXK0 858 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 ZNF784Q8NCA9 323 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 PTCD3Q96EY7 689 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 EHD1Q9H4M9 534 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 VRTNQ9H8Y1 702 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 PNPOQ9NVS9 261 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 POLR3BQ9NW08 1133 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 PLCH1Q4KWH8 1693 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 M0QX08 132 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 ECDO95905 644 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 HNRNPLP14866 589 aaKnown RBP eCLIP10.52□□□□□ -0.732e-12■□□□□ 8.8
AMBRA1-202ENST00000458649 MAGP20916 626 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 CCSAPQ6IQ19 270 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 TMEM53Q6P2H8 277 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 LIX1Q8N485 282 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 FAM98AQ8NCA5 519 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 ZNF354BQ96LW1 612 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 CCDC115Q96NT0 180 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 XKR8Q9H6D3 395 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 RGS17Q9UGC6 210 aaPredicted RBP10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 I3L521 148 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 KDELR3O43731 214 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 GSTM5P46439 218 aa10.52□□□□□ -0.73
AMBRA1-202ENST00000458649 PTSQ03393 145 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms