RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 VASH2Q86V25 355 aa22.43■■□□□ 1.18
CBX3-204ENST00000456948 AGGF1Q8N302 714 aaeCLIP22.43■■□□□ 1.18
CBX3-204ENST00000456948 INPP5DQ92835 1189 aa22.43■■□□□ 1.18
CBX3-204ENST00000456948 SPRY4Q9C004 299 aa22.43■■□□□ 1.18
CBX3-204ENST00000456948 RAB17Q9H0T7 212 aa22.43■■□□□ 1.18
CBX3-204ENST00000456948 GPN2Q9H9Y4 310 aaPredicted RBP22.43■■□□□ 1.18
CBX3-204ENST00000456948 FAM114A2Q9NRY5 505 aa22.43■■□□□ 1.18
CBX3-204ENST00000456948 SNX24Q9Y343 169 aa22.43■■□□□ 1.18
CBX3-204ENST00000456948 LOC400499M0QZD8 3231 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 FANCGO15287 622 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 VPS26AO75436 327 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 KIAA0754O94854 1291 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 ERVK-10P10266 1014 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 CD9P21926 228 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 ELK3P41970 407 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 SKIV2L2P42285 1042 aaKnown RBP22.42■■□□□ 1.18
CBX3-204ENST00000456948 MSS51Q4VC12 460 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 NEK10Q6ZWH5 1172 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 FAM136AQ96C01 138 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 TRIM44Q96DX7 344 aaPredicted RBP22.42■■□□□ 1.18
CBX3-204ENST00000456948 CERS2Q96G23 380 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 CFAP36Q96G28 342 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 TCTN2Q96GX1 697 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 BBC3Q96PG8 261 aaPredicted RBP22.42■■□□□ 1.18
CBX3-204ENST00000456948 TRAPPC9Q96Q05 1148 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 INTS7Q9NVH2 962 aaKnown RBP22.42■■□□□ 1.18
CBX3-204ENST00000456948 WHRNQ9P202 907 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 PADI1Q9ULC6 663 aa22.42■■□□□ 1.18
CBX3-204ENST00000456948 A0A0J9YY10 115 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 RASGRF2O14827 1237 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 FKBP9O95302 570 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 C1orf105O95561 183 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 DLGAP3O95886 979 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 CATP04040 527 aaKnown RBP22.41■■□□□ 1.18
CBX3-204ENST00000456948 MSL3P1P0C860 447 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 ENO3P13929 434 aaPredicted RBP22.41■■□□□ 1.18
CBX3-204ENST00000456948 UGT2B7P16662 529 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 PKLRP30613 574 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 MC1RQ01726 317 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 LRRC8EQ6NSJ5 796 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 CNSTQ6PJW8 725 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 TMEM126BQ8IUX1 230 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 C2CD4AQ8NCU7 369 aaPredicted RBP22.41■■□□□ 1.18
CBX3-204ENST00000456948 LSM14AQ8ND56 463 aaKnown RBP22.41■■□□□ 1.18
CBX3-204ENST00000456948 OR2L8Q8NGY9 312 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 C16orf45Q96MC5 204 aaPredicted RBP22.41■■□□□ 1.18
CBX3-204ENST00000456948 SLC7A5P2Q9GIP4 190 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.41■■□□□ 1.18
CBX3-204ENST00000456948 PLAGL1Q9UM63 463 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 CHMP2BQ9UQN3 213 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 TEX264Q9Y6I9 313 aa22.41■■□□□ 1.18
CBX3-204ENST00000456948 ZNF839A8K0R7 811 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 ERVH48-1M5A8F1 160 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 KIF2AO00139 706 aaPredicted RBP22.4■■□□□ 1.18
CBX3-204ENST00000456948 HAUS5O94927 633 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 CBSLP0DN79 551 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 CBSP35520 551 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 HSD17B2P37059 387 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 RPL21P46778 160 aaKnown RBP22.4■■□□□ 1.18
CBX3-204ENST00000456948 CARSP49589 748 aaKnown RBP22.4■■□□□ 1.18
CBX3-204ENST00000456948 CAV1Q03135 178 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 PDIA2Q13087 525 aaKnown RBP22.4■■□□□ 1.18
CBX3-204ENST00000456948 SLC5A12Q1EHB4 618 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 KLHL38Q2WGJ6 581 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 TAF1BQ53T94 588 aaPredicted RBP22.4■■□□□ 1.18
CBX3-204ENST00000456948 ZNF789Q5FWF6 425 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 FBXO38Q6PIJ6 1188 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 GPR135Q8IZ08 494 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 GALNT6Q8NCL4 622 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 OR2A14Q96R47 310 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 CHRNA10Q9GZZ6 450 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 TAS2R13Q9NYV9 303 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 CDC23Q9UJX2 597 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 DHRS7Q9Y394 339 aa22.4■■□□□ 1.18
CBX3-204ENST00000456948 EIF3FO00303 357 aaPredicted RBP22.39■■□□□ 1.17
CBX3-204ENST00000456948 CPNE3O75131 537 aaKnown RBP22.39■■□□□ 1.17
CBX3-204ENST00000456948 BANF1O75531 89 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 SCRG1O75711 98 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 MATN4O95460 622 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 KLK3P07288 261 aaPredicted RBP22.39■■□□□ 1.17
CBX3-204ENST00000456948 ST6GAL1P15907 406 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 RGS4P49798 205 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 CLCN7P51798 805 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 MPP1Q00013 466 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 C2orf54Q08AI8 447 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 ILF2Q12905 390 aaKnown RBP22.39■■□□□ 1.17
CBX3-204ENST00000456948 FRG1Q14331 258 aaKnown RBP22.39■■□□□ 1.17
CBX3-204ENST00000456948 GBX1Q14549 363 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 GPR19Q15760 415 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 HP1BP3Q5SSJ5 553 aaPredicted RBP22.39■■□□□ 1.17
CBX3-204ENST00000456948 PWWP2BQ6NUJ5 590 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 GALNT7Q86SF2 657 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 CNTN4Q8IWV2 1026 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 PALM2Q8IXS6 379 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 ZNF501Q96CX3 271 aaPredicted RBP22.39■■□□□ 1.17
CBX3-204ENST00000456948 PPM1MQ96MI6 270 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 AARSD1Q9BTE6 412 aaKnown RBP22.39■■□□□ 1.17
CBX3-204ENST00000456948 SPATA7Q9P0W8 599 aa22.39■■□□□ 1.17
CBX3-204ENST00000456948 TRMT6Q9UJA5 497 aaKnown RBP22.39■■□□□ 1.17
CBX3-204ENST00000456948 KCND3Q9UK17 655 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms