RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 MFAP3LO75121 409 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 ALBP02768 609 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 RPN2P04844 631 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 RNF224P0DH78 156 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 UGT2B7P16662 529 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 ITGAXP20702 1163 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 PTMSP20962 102 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 RBL1P28749 1068 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 MC4RP32245 332 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 CA5AP35218 305 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 NSG1P42857 185 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 GLRBP48167 497 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 ARSFP54793 590 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 CACNG1Q06432 222 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 RAPSNQ13702 412 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 PTPRCAPQ14761 206 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 NAA30Q147X3 362 aaPredicted RBP7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 KIR2DS3Q14952 304 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 SLC5A12Q1EHB4 618 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 NKAIN1Q4KMZ8 207 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 FAM182AQ5T1J6 154 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 AGAP7PQ5VUJ5 663 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 YOD1Q5VVQ6 348 aaPredicted RBP7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 B3GNTL1Q67FW5 361 aaPredicted RBP7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 FCRL6Q6DN72 434 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 C11orf63Q6NUN7 778 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 Q6ZS92 163 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 TAS2R42Q7RTR8 314 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 TBC1D21Q8IYX1 336 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 LILRA3Q8N6C8 439 aaPredicted RBP7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 PPP4R1Q8TF05 950 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 SLC22A18Q96BI1 424 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 MOCOSQ96EN8 888 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 C19orf60Q96EN9 201 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 SPATA13Q96N96 652 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 AGAP4Q96P64 663 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 GBP5Q96PP8 586 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 CHP1Q99653 195 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 BARD1Q99728 777 aaKnown RBP7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 TBL1YQ9BQ87 522 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 WDR77Q9BQA1 342 aaPredicted RBP7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 TSSK1BQ9BXA7 367 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 ZNF552Q9H707 407 aaPredicted RBP7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 WDR54Q9H977 334 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 INTS7Q9NVH2 962 aaKnown RBP7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 IL1RAPL1Q9NZN1 696 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 NXT1Q9UKK6 140 aaKnown RBP7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 PLCL2Q9UPR0 1127 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 ICKQ9UPZ9 632 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 ASF1AQ9Y294 204 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 HYOU1Q9Y4L1 999 aa7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 UTP20O75691 2785 aaKnown RBP7.74□□□□□ -1.17
NIF3L1-209ENST00000454952 ITPR2Q14571 2701 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 SNRNP200O75643 2136 aaKnown RBP7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 TRBV5-4A0A0C4DH59 114 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 MACROD2A1Z1Q3 448 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 CCDC78A2IDD5 438 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 DDX3YO15523 660 aaKnown RBP7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 KCNN4O15554 427 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 PSMD3O43242 534 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 HNRNPRO43390 633 aaKnown RBP7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 TJP3O95049 919 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 FKBP9O95302 570 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 AP2A1O95782 977 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 CLDN1O95832 211 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 GAS8O95995 478 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 CHRM5P08912 532 aaPredicted RBP7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 CBSLP0DN79 551 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 EDN3P14138 238 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 PVRP15151 417 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 MMP11P24347 488 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 ITGA3P26006 1051 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 PSMB4P28070 264 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 PTPN7P35236 360 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 CBSP35520 551 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 EIF3EP60228 445 aaKnown RBP7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 TMPRSS15P98073 1019 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 PRKG2Q13237 762 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 ITIH4Q14624 930 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 LLGL1Q15334 1064 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 TLR1Q15399 786 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 SPA17Q15506 151 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 P3H1Q32P28 736 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 ZNF658BQ4V348 819 aaPredicted RBP7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 SYTL3Q4VX76 610 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 DNAJC21Q5F1R6 531 aaKnown RBP7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 ZC3H12BQ5HYM0 836 aaKnown RBP7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 ANKRD20A2Q5SQ80 823 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 ANKRD20A1Q5TYW2 823 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 C1orf189Q5VU69 101 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 FAM69BQ5VUD6 431 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 ANKRD20A3Q5VUR7 823 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 PRAMEF13Q5VWM6 474 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 ZNF787Q6DD87 383 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 MRPL14Q6P1L8 145 aaKnown RBP7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 DARS2Q6PI48 645 aaKnown RBP7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 PACS1Q6VY07 963 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 UNC5AQ6ZN44 842 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 PPP1R32Q7Z5V6 425 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 SERPINA9Q86WD7 417 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms