RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ABRQ12979 859 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 CLN3Q13286 438 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 KLHL38Q2WGJ6 581 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 GLE1Q53GS7 698 aaKnown RBP13.72□□□□□ -0.21
HDAC4-205ENST00000454542 ANKS6Q68DC2 871 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 ARMC6Q6NXE6 501 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 SPESP1Q6UW49 350 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 SPNS2Q8IVW8 549 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 SPACA3Q8IXA5 215 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 HMGCLL1Q8TB92 370 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 DENND1AQ8TEH3 1009 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 PYROXD1Q8WU10 500 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 KCNE4Q8WWG9 221 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 INPP5DQ92835 1189 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 NDNQ99608 321 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 ZPBPQ9BS86 351 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 RAB11FIP5Q9BXF6 653 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 ASPSCR1Q9BZE9 553 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 DPH1Q9BZG8 443 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 CHRNA10Q9GZZ6 450 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 APMAPQ9HDC9 416 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 SLC39A1Q9NY26 324 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 SPHK1Q9NYA1 384 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 SPATA7Q9P0W8 599 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 ZFATQ9P243 1243 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 PLAGL1Q9UM63 463 aa13.72□□□□□ -0.21
HDAC4-205ENST00000454542 TDRKHQ9Y2W6 561 aaKnown RBP13.72□□□□□ -0.21
HDAC4-205ENST00000454542 SNRNP200O75643 2136 aaKnown RBP13.72□□□□□ -0.21
HDAC4-205ENST00000454542 URB1O60287 2271 aaKnown RBP13.71□□□□□ -0.21
HDAC4-205ENST00000454542 AHCTF1Q8WYP5 2266 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 TCRBV9S1A1TA0A576 114 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 GSAPA4D1B5 854 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 FAM159BA6NKW6 160 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 ARHGEF33A8MVX0 844 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 MYO1CO00159 1063 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 PRICKLE3O43900 615 aaPredicted RBP13.71□□□□□ -0.21
HDAC4-205ENST00000454542 VPS26AO75436 327 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 DLGAP3O95886 979 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 FGF5P12034 268 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 UGT2B7P16662 529 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 SSTR1P30872 391 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 ABCG1P45844 678 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 CDKN2DP55273 166 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 TLE3Q04726 772 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 CUL1Q13616 776 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 KIR2DS3Q14952 304 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 SLC5A12Q1EHB4 618 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 CCSMST1Q4G0I0 132 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 DCAF12Q5T6F0 453 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 TMEM164Q5U3C3 297 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 LRRC8EQ6NSJ5 796 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 FAM45BPQ6NSW5 357 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 CEACAM20Q6UY09 585 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 CYHR1Q6ZMK1 362 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 ZC3HC1Q86WB0 502 aaKnown RBP13.71□□□□□ -0.21
HDAC4-205ENST00000454542 CPNE9Q8IYJ1 553 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 CEP112Q8N8E3 955 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 OR2L8Q8NGY9 312 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 FAM45AQ8TCE6 357 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 RAD51AP1Q96B01 352 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 FOPNLQ96NB1 174 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 OR2A14Q96R47 310 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 FAM114A2Q9NRY5 505 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 NSMCE4AQ9NXX6 385 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 TAS2R13Q9NYV9 303 aa13.71□□□□□ -0.21
HDAC4-205ENST00000454542 TRMT6Q9UJA5 497 aaKnown RBP13.71□□□□□ -0.21
HDAC4-205ENST00000454542 TMEM184BQ9Y519 407 aaPredicted RBP13.71□□□□□ -0.21
HDAC4-205ENST00000454542 PIPSLA2A3N6 862 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 GFYI3L273 518 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 RRP8O43159 456 aaKnown RBP13.7□□□□□ -0.22
HDAC4-205ENST00000454542 TSPAN12O95859 305 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 EBLN1P0CF75 366 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 ST6GAL1P15907 406 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 HSD11B2P80365 405 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 ILF2Q12905 390 aaKnown RBP13.7□□□□□ -0.22
HDAC4-205ENST00000454542 IL11RAQ14626 422 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 CYP2A13Q16696 494 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 HECTD2Q5U5R9 776 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 UGT3A1Q6NUS8 523 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 CYB5D1Q6P9G0 228 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 FBXO38Q6PIJ6 1188 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 PIWIL4Q7Z3Z4 852 aaKnown RBP13.7□□□□□ -0.22
HDAC4-205ENST00000454542 RELL1Q8IUW5 271 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 CFAP61Q8NHU2 1237 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 MAGEC3Q8TD91 643 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 DCBLD2Q96PD2 775 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 IL17FQ96PD4 163 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 TRAPPC9Q96Q05 1148 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 OLFM1Q99784 485 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 RHOJQ9H4E5 214 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 L2HGDHQ9H9P8 463 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 PPANQ9NQ55 473 aaKnown RBP13.7□□□□□ -0.22
HDAC4-205ENST00000454542 PCDHB11Q9Y5F2 797 aa13.7□□□□□ -0.22
HDAC4-205ENST00000454542 CACNA1BQ00975 2339 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 PTPRQQ9UMZ3 2332 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 A0A0J9YY10 115 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 KRT87PA6NCN2 255 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 STMND1H3BQB6 276 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 POLR1CO15160 346 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-205ENST00000454542 SPAG6O75602 509 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms