RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 LGMNQ99538 433 aa1.74□□□□□ -2.13
LRCH3-209ENST00000452660 NCAPGQ9BPX3 1015 aa1.74□□□□□ -2.13
LRCH3-209ENST00000452660 HGH1Q9BTY7 390 aa1.74□□□□□ -2.13
LRCH3-209ENST00000452660 AGXT2Q9BYV1 514 aa1.74□□□□□ -2.13
LRCH3-209ENST00000452660 PAIP1Q9H074 479 aaKnown RBP1.74□□□□□ -2.13
LRCH3-209ENST00000452660 PDCL3Q9H2J4 239 aa1.74□□□□□ -2.13
LRCH3-209ENST00000452660 TUBB1Q9H4B7 451 aa1.74□□□□□ -2.13
LRCH3-209ENST00000452660 SPHK2Q9NRA0 654 aa1.74□□□□□ -2.13
LRCH3-209ENST00000452660 PCDHB16Q9NRJ7 776 aa1.74□□□□□ -2.13
LRCH3-209ENST00000452660 EHD2Q9NZN4 543 aa1.74□□□□□ -2.13
LRCH3-209ENST00000452660 DGKBQ9Y6T7 804 aa1.74□□□□□ -2.13
LRCH3-209ENST00000452660 ZCCHC6Q5VYS8 1495 aaKnown RBP1.74□□□□□ -2.13
LRCH3-209ENST00000452660 SIGLEC1Q9BZZ2 1709 aa1.74□□□□□ -2.13
LRCH3-209ENST00000452660 PRG4Q92954 1404 aaPredicted RBP1.74□□□□□ -2.13
LRCH3-209ENST00000452660 CUL7Q14999 1698 aa1.74□□□□□ -2.13
LRCH3-209ENST00000452660 PBRM1Q86U86 1689 aa1.74□□□□□ -2.13
LRCH3-209ENST00000452660 SHROOM2Q13796 1616 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 ALKQ9UM73 1620 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 MAP3K4Q9Y6R4 1608 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 ZNF541Q9H0D2 1346 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 ZNF644Q9H582 1327 aaPredicted RBP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 EPRSP07814 1512 aaKnown RBP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 ZNF195O14628 629 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 TFECO14948 347 aaPredicted RBP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 TO15178 435 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 TMEM63AO94886 807 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 SLCO2B1O94956 709 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 SEC24AO95486 1093 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 EIF2S1P05198 315 aaKnown RBP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 POLBP06746 335 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 GP9P14770 177 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 CNTFP26441 200 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 MAPK9P45984 424 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 HARS2P49590 506 aaKnown RBP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 LYZP61626 148 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 CEBPZQ03701 1054 aaKnown RBP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 PLA2G7Q13093 441 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 EIF4A2Q14240 407 aaKnown RBP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 EFTUD2Q15029 972 aaKnown RBP eCLIP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 KLHL26Q53HC5 615 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 FHL5Q5TD97 284 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 DMKNQ6E0U4 476 aaPredicted RBP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 NCEH1Q6PIU2 408 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 CYP20A1Q6UW02 462 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 CFAP77Q6ZQR2 320 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 Q6ZVH6 145 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 NUDT13Q86X67 352 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 METTL4Q8N3J2 472 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 TRIML1Q8N9V2 468 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 HJURPQ8NCD3 748 aaPredicted RBP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 POMGNT1Q8WZA1 660 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 NKX3-1Q99801 234 aaPredicted RBP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 TRAF4Q9BUZ4 470 aaPredicted RBP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 MTMR12Q9C0I1 747 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 JMJD4Q9H9V9 463 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 POLR1BQ9H9Y6 1135 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 PPANQ9NQ55 473 aaKnown RBP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 RRP7BPQ9NSQ0 103 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 GGA3Q9NZ52 723 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 ZNF107Q9UII5 783 aaPredicted RBP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 POMT2Q9UKY4 750 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 PNMA2Q9UL42 364 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 GRIP1Q9Y3R0 1128 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 RIPK3Q9Y572 518 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 ANGPTL3Q9Y5C1 460 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 CSNK1G3Q9Y6M4 447 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 POLA1P09884 1462 aaPredicted RBP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 CFTRP13569 1480 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 IQSEC2Q5JU85 1478 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 MAGI1Q96QZ7 1491 aaPredicted RBP1.73□□□□□ -2.13
LRCH3-209ENST00000452660 PREX1Q8TCU6 1659 aa1.73□□□□□ -2.13
LRCH3-209ENST00000452660 PEG3Q9GZU2 1588 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 ABCC2Q92887 1545 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 PRSS51A0A1B0GVH4 220 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 IFRD1O00458 451 aaPredicted RBP1.72□□□□□ -2.13
LRCH3-209ENST00000452660 DDX58O95786 925 aaKnown RBP1.72□□□□□ -2.13
LRCH3-209ENST00000452660 CLEC3BP05452 202 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 SRPRAP08240 638 aaKnown RBP1.72□□□□□ -2.13
LRCH3-209ENST00000452660 CAPGP40121 348 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 PBX3P40426 434 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 MTHFRP42898 656 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 HLCSP50747 726 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 GALCP54803 685 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 PRAMEP78395 509 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 BIRC2Q13490 618 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 EIF4EBP2Q13542 120 aaPredicted RBP1.72□□□□□ -2.13
LRCH3-209ENST00000452660 MELKQ14680 651 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 INTS8Q75QN2 995 aaKnown RBP1.72□□□□□ -2.13
LRCH3-209ENST00000452660 G2E3Q7L622 706 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 KRTAP11-1Q8IUC1 163 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 SUMF1Q8NBK3 374 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 OR1L3Q8NH93 324 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 TBC1D16Q8TBP0 767 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 KCNG4Q8TDN1 519 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 CCDC107Q8WV48 283 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 PDLIM5Q96HC4 596 aaKnown RBP1.72□□□□□ -2.13
LRCH3-209ENST00000452660 FAM81BQ96LP2 452 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 C1orf74Q96LT6 269 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 DDOQ99489 341 aa1.72□□□□□ -2.13
LRCH3-209ENST00000452660 ARPC5LQ9BPX5 153 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms