RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 OR4F6Q8NGB9 312 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 ATOH1Q92858 354 aaPredicted RBP10.47□□□□□ -0.73
PKP4-206ENST00000452162 RHBDF1Q96CC6 855 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 TEX37Q96LM6 180 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 RDH14Q9HBH5 336 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 PRSS16Q9NQE7 514 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 ZSCAN32Q9NX65 697 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 EBF1Q9UH73 591 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 THADAQ6YHU6 1953 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 ANKRD12Q6UB98 2062 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 CEP192Q8TEP8 1941 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 TSPAN11A1L157 253 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 ASPDHA6ND91 283 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 EIF4E1BA6NMX2 242 aaKnown RBP10.47□□□□□ -0.73
PKP4-206ENST00000452162 GUCA1CO95843 209 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 CAPNS1P04632 268 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 AQP4P55087 323 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 CAMK2GQ13555 558 aaPredicted RBP10.47□□□□□ -0.73
PKP4-206ENST00000452162 GBX1Q14549 363 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 METTL2BQ6P1Q9 378 aaKnown RBP10.47□□□□□ -0.73
PKP4-206ENST00000452162 PRMT9Q6P2P2 845 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 SPATA24Q86W54 205 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 PGBD3Q8N328 593 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 SFRP1Q8N474 314 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 METTL6Q8TCB7 284 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 GATA6Q92908 595 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 SPDL1Q96EA4 605 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 MRGPRX1Q96LB2 322 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 NR1H4Q96RI1 486 aaPredicted RBP10.47□□□□□ -0.73
PKP4-206ENST00000452162 HOPXQ9BPY8 73 aaPredicted RBP10.47□□□□□ -0.73
PKP4-206ENST00000452162 CD244Q9BZW8 370 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 IPPKQ9H8X2 491 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 CD93Q9NPY3 652 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 TMEM45AQ9NWC5 275 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 ZIM2Q9NZV7 527 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 SUN2Q9UH99 717 aa10.47□□□□□ -0.73
PKP4-206ENST00000452162 PLXND1Q9Y4D7 1925 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 PIKFYVEQ9Y2I7 2098 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 A6NHS1 94 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 EIF3FO00303 357 aaPredicted RBP10.46□□□□□ -0.73
PKP4-206ENST00000452162 NME4O00746 187 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 AXIN1O15169 862 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 CCR7P32248 378 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 NNMTP40261 264 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 POLR2LP62875 67 aaKnown RBP10.46□□□□□ -0.73
PKP4-206ENST00000452162 FOXM1Q08050 763 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 C9orf64Q5T6V5 341 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 BRAT1Q6PJG6 821 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 TICAM1Q8IUC6 712 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 DUS3LQ96G46 650 aaKnown RBP10.46□□□□□ -0.73
PKP4-206ENST00000452162 EGFL8Q99944 293 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 HEPHQ9BQS7 1158 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 C1orf50Q9BV19 199 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 ABCG8Q9H221 673 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 SMOXQ9NWM0 555 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 WWOXQ9NZC7 414 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 PKD2L2Q9NZM6 624 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 GMPR2Q9P2T1 348 aaKnown RBP10.46□□□□□ -0.73
PKP4-206ENST00000452162 MBD1Q9UIS9 605 aaPredicted RBP10.46□□□□□ -0.73
PKP4-206ENST00000452162 INVSQ9Y283 1065 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 PLXNA2O75051 1894 aa10.46□□□□□ -0.73
PKP4-206ENST00000452162 RIF1Q5UIP0 2472 aaKnown RBP10.46□□□□□ -0.73
PKP4-206ENST00000452162 EDDM13A0A1B0GTR0 161 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 A0A1W2PP18 115 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 TCRBV3S1A0A5B6 114 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 HRO43593 1189 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 ZNF30P17039 623 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 AOAHP28039 575 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 IL12AP29459 219 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 VIPR1P32241 457 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 RECQLP46063 649 aaPredicted RBP10.46□□□□□ -0.74
PKP4-206ENST00000452162 VASPP50552 380 aaPredicted RBP10.46□□□□□ -0.74
PKP4-206ENST00000452162 UFM1P61960 85 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 RHDQ02161 417 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 ATP6AP1LQ52LC2 224 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 RNF165Q6ZSG1 346 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 HSD11B1LQ7Z5J1 315 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 WDR5BQ86VZ2 330 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 FRMD1Q8N878 549 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 OR2T3Q8NH03 318 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 RLN3Q8WXF3 142 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 LRRC58Q96CX6 371 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 PKP2Q99959 881 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 COPS7BQ9H9Q2 264 aaPredicted RBP10.46□□□□□ -0.74
PKP4-206ENST00000452162 GID8Q9NWU2 228 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 OPTCQ9UBM4 332 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 DTNAQ9Y4J8 743 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 CCL27Q9Y4X3 112 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 PCDHGA2Q9Y5H1 932 aa10.46□□□□□ -0.74
PKP4-206ENST00000452162 ZFHX2Q9C0A1 2572 aaPredicted RBP10.45□□□□□ -0.74
PKP4-206ENST00000452162 CCDC163A0A0D9SF12 145 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 K7EPI3 171 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 LSM1O15116 133 aaKnown RBP10.45□□□□□ -0.74
PKP4-206ENST00000452162 DNAJA2O60884 412 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 KATNA1O75449 491 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 EEDO75530 441 aaKnown RBP10.45□□□□□ -0.74
PKP4-206ENST00000452162 LEFTY1O75610 366 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 SLC22A3O75751 556 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 OR56A5P0C7T3 313 aa10.45□□□□□ -0.74
PKP4-206ENST00000452162 CYP2A6P11509 494 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms