RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 PROS1P07225 676 aa23.33■■□□□ 1.33
CPSF4-207ENST00000451876 ID4P47928 161 aa23.33■■□□□ 1.33
CPSF4-207ENST00000451876 PPM1FP49593 454 aaPredicted RBP23.33■■□□□ 1.33
CPSF4-207ENST00000451876 PPP1CAP62136 330 aa23.33■■□□□ 1.33
CPSF4-207ENST00000451876 MBOAT1Q6ZNC8 495 aa23.33■■□□□ 1.33
CPSF4-207ENST00000451876 MAGEC3Q8TD91 643 aa23.33■■□□□ 1.33
CPSF4-207ENST00000451876 ANKRD7Q92527 254 aa23.33■■□□□ 1.33
CPSF4-207ENST00000451876 PKP4Q99569 1192 aa23.33■■□□□ 1.33
CPSF4-207ENST00000451876 ROPN1BQ9BZX4 212 aaPredicted RBP23.33■■□□□ 1.33
CPSF4-207ENST00000451876 SRMSQ9H3Y6 488 aa23.33■■□□□ 1.33
CPSF4-207ENST00000451876 ROPN1Q9HAT0 212 aaPredicted RBP23.33■■□□□ 1.33
CPSF4-207ENST00000451876 TMEM9Q9P0T7 183 aa23.33■■□□□ 1.33
CPSF4-207ENST00000451876 OR6C74A6NCV1 312 aa23.33■■□□□ 1.32
CPSF4-207ENST00000451876 BTN3A3O00478 584 aa23.33■■□□□ 1.32
CPSF4-207ENST00000451876 SLC16A5O15375 505 aa23.33■■□□□ 1.32
CPSF4-207ENST00000451876 LTA4HP09960 611 aaKnown RBP23.33■■□□□ 1.32
CPSF4-207ENST00000451876 AMD1P17707 334 aa23.33■■□□□ 1.32
CPSF4-207ENST00000451876 MAP4P27816 1152 aaKnown RBP23.33■■□□□ 1.32
CPSF4-207ENST00000451876 PKLRP30613 574 aa23.33■■□□□ 1.32
CPSF4-207ENST00000451876 SLC26A3P40879 764 aa23.33■■□□□ 1.32
CPSF4-207ENST00000451876 RAB28P51157 221 aa23.33■■□□□ 1.32
CPSF4-207ENST00000451876 E2F1Q01094 437 aa23.33■■□□□ 1.32
CPSF4-207ENST00000451876 LINC01555Q8NAE3 123 aa23.33■■□□□ 1.32
CPSF4-207ENST00000451876 OR9A1PQ8NGU1 263 aa23.33■■□□□ 1.32
CPSF4-207ENST00000451876 GFM1Q96RP9 751 aaKnown RBP23.33■■□□□ 1.32
CPSF4-207ENST00000451876 TMEM109Q9BVC6 243 aa23.33■■□□□ 1.32
CPSF4-207ENST00000451876 PARVBQ9HBI1 364 aa23.33■■□□□ 1.32
CPSF4-207ENST00000451876 PCMTD2Q9NV79 361 aa23.33■■□□□ 1.32
CPSF4-207ENST00000451876 UTP6Q9NYH9 597 aaKnown RBP23.33■■□□□ 1.32
CPSF4-207ENST00000451876 OR5K3A6NET4 321 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 D6RAR5 112 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 GOLGA8RI6L899 631 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 ZW10O43264 779 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 CPNE6O95741 557 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 SLC16A8O95907 504 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 MPOP05164 745 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 HOXB3P14651 431 aaPredicted RBP23.32■■□□□ 1.32
CPSF4-207ENST00000451876 CYP2A7P20853 494 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 SHMT2P34897 504 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 ATP6V0D1P61421 351 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 SPIDRQ14159 915 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 OR4D1Q15615 310 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 CCDC91Q7Z6B0 441 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 ADGRF3Q8IZF5 1079 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 RIBC1Q8N443 379 aaPredicted RBP23.32■■□□□ 1.32
CPSF4-207ENST00000451876 C2orf73Q8N5S3 287 aaPredicted RBP23.32■■□□□ 1.32
CPSF4-207ENST00000451876 NCSTNQ92542 709 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 EPB41L1Q9H4G0 881 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 ZNF358Q9NW07 568 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 HRASLS2Q9NWW9 162 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 LGALS13Q9UHV8 139 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 SPTBN2O15020 2390 aa23.32■■□□□ 1.32
CPSF4-207ENST00000451876 KLHL2O95198 593 aa23.31■■□□□ 1.32
CPSF4-207ENST00000451876 KRT15P19012 456 aa23.31■■□□□ 1.32
CPSF4-207ENST00000451876 POLR2CP19387 275 aaPredicted RBP23.31■■□□□ 1.32
CPSF4-207ENST00000451876 GLRBP48167 497 aa23.31■■□□□ 1.32
CPSF4-207ENST00000451876 PDX1P52945 283 aa23.31■■□□□ 1.32
CPSF4-207ENST00000451876 GFERP55789 205 aa23.31■■□□□ 1.32
CPSF4-207ENST00000451876 CASP8Q14790 479 aa23.31■■□□□ 1.32
CPSF4-207ENST00000451876 ZNF574Q6ZN55 896 aaPredicted RBP23.31■■□□□ 1.32
CPSF4-207ENST00000451876 CLEC14AQ86T13 490 aa23.31■■□□□ 1.32
CPSF4-207ENST00000451876 ISCA2Q86U28 154 aa23.31■■□□□ 1.32
CPSF4-207ENST00000451876 OOSP2Q86WS3 158 aa23.31■■□□□ 1.32
CPSF4-207ENST00000451876 MCOLN3Q8TDD5 553 aa23.31■■□□□ 1.32
CPSF4-207ENST00000451876 GPR78Q96P69 363 aa23.31■■□□□ 1.32
CPSF4-207ENST00000451876 ZMYND15Q9H091 742 aa23.31■■□□□ 1.32
CPSF4-207ENST00000451876 ALG9Q9H6U8 611 aa23.31■■□□□ 1.32
CPSF4-207ENST00000451876 ARGLU1Q9NWB6 273 aaPredicted RBP23.31■■□□□ 1.32
CPSF4-207ENST00000451876 UQCRHLA0A096LP55 91 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 FAM221BA6H8Z2 402 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 KDM1AO60341 852 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 UQCRHP07919 91 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 ERGP11308 486 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 TFEBP19484 476 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 MPSTP25325 297 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 SQSTM1Q13501 440 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 FASTKQ14296 549 aaKnown RBP23.3■■□□□ 1.32
CPSF4-207ENST00000451876 KRT71Q3SY84 523 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 ADAMTSL2Q86TH1 951 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 TAX1BP1Q86VP1 789 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 ZNF480Q8WV37 535 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 SPHK1Q9NYA1 384 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 PCM1Q15154 2024 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 GUCA1CO95843 209 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 PYGBP11216 843 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 IMPA1P29218 277 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 PEBP1P30086 187 aaKnown RBP23.3■■□□□ 1.32
CPSF4-207ENST00000451876 KCNC1P48547 511 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 HES3Q5TGS1 186 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 CDCP2Q5VXM1 449 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 KLHL35Q6PF15 583 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 WDR74Q6RFH5 385 aaPredicted RBP23.3■■□□□ 1.32
CPSF4-207ENST00000451876 PPFIBP2Q8ND30 876 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 OR2L8Q8NGY9 312 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 WDR48Q8TAF3 677 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 KIAA1191Q96A73 305 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 RAB11FIP5Q9BXF6 653 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 TWSG1Q9GZX9 223 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 NMRAL1Q9HBL8 299 aa23.3■■□□□ 1.32
CPSF4-207ENST00000451876 ARL15Q9NXU5 204 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms