RNA–Protein interactions for RNA: ENST00000449832.1

AC009961.3-201, humanhuman

BASIC

Gene AC009961.3, Length 765 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.3-201ENST00000449832 PNLIPRP2P54317 469 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 TPD52P55327 224 aaPredicted RBP3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 SIRPAP78324 504 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 DDX10Q13206 875 aaKnown RBP3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 KRT33BQ14525 404 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 TAF13Q15543 124 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 SGSM1Q2NKQ1 1148 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 FAAH2Q6GMR7 532 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 FAM180BQ6P0A1 224 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 HAUS6Q7Z4H7 955 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 CEP57Q86XR8 500 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 PPFIBP2Q8ND30 876 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 PHLDA1Q8WV24 401 aaPredicted RBP3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 GTF3AQ92664 365 aaKnown RBP3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 KRT12Q99456 494 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 LMF2Q9BU23 707 aaKnown RBP3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 SHARPINQ9H0F6 387 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 ZNF69Q9UC07 566 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 ZNF148Q9UQR1 794 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 WDR37Q9Y2I8 494 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 ANGPTL3Q9Y5C1 460 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 CSAG2Q9Y5P2 127 aa3.35□□□□□ -1.87
AC009961.3-201ENST00000449832 SHROOM2Q13796 1616 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 TMEM221A6NGB7 291 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 VILLO15195 856 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 DOK2O60496 412 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 ZWINTO95229 277 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 UGT1A4P22310 534 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 KRTAP5-9P26371 169 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 ANP32AP39687 249 aaKnown RBP3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 HERV-K104P61576 105 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 NR1D2Q14995 579 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 NECTIN1Q15223 517 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 SLC25A53Q5H9E4 307 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 TAF3Q5VWG9 929 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 TEX38Q6PEX7 206 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 HOGA1Q86XE5 327 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 NPEPL1Q8NDH3 523 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 FRAT1Q92837 279 aaPredicted RBP3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 SAT2Q96F10 170 aaPredicted RBP3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 CCDC34Q96HJ3 373 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 NSMCE3Q96MG7 304 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 OLFM1Q99784 485 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 PITPNM3Q9BZ71 974 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 PNNQ9H307 717 aaKnown RBP3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 CPVLQ9H3G5 476 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 SMARCAD1Q9H4L7 1026 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 CCDC177Q9NQR7 707 aaPredicted RBP3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 SLC7A10Q9NS82 523 aa3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 ZNF644Q9H582 1327 aaPredicted RBP3.34□□□□□ -1.87
AC009961.3-201ENST00000449832 EIF4G1Q04637 1599 aaKnown RBP3.34□□□□□ -1.88
AC009961.3-201ENST00000449832 A0A1W2PPR1 153 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 SOCS3O14543 225 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 ZNF195O14628 629 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 ADAMDEC1O15204 470 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 LETM1O95202 739 aaPredicted RBP3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 TRIM21P19474 475 aaKnown RBP3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 CYP2A7P20853 494 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 OPRL1P41146 370 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 SLC15A1P46059 708 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 MAZP56270 477 aaKnown RBP3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 NFATC2Q13469 925 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 UGP2Q16851 508 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 HLA-BQ31612 363 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 C2CD6Q53TS8 623 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 KRT79Q5XKE5 535 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 BTN2A1Q7KYR7 527 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 SH2D6Q7Z4S9 175 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 LRRTM1Q86UE6 522 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 EID3Q8N140 333 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 RAB42Q8N4Z0 105 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 OTUD6BQ8N6M0 293 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 SLCO2A1Q92959 643 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 CENPTQ96BT3 561 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 TRIM44Q96DX7 344 aaPredicted RBP3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 C10orf90Q96M02 699 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 FOXN4Q96NZ1 517 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 PIGQQ9BRB3 760 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 FNDC11Q9BVV2 318 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 SERINC1Q9NRX5 453 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 FGF21Q9NSA1 209 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 PANK4Q9NVE7 773 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 ARHGEF38Q9NXL2 777 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 EPHA6Q9UF33 1036 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 DAPK2Q9UIK4 370 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 WBP11Q9Y2W2 641 aaKnown RBP3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 NME7Q9Y5B8 376 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 PCDH11YQ9BZA8 1340 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 RAD54L2Q9Y4B4 1467 aa3.33□□□□□ -1.88
AC009961.3-201ENST00000449832 ADAMTS9Q9P2N4 1935 aa3.32□□□□□ -1.88
AC009961.3-201ENST00000449832 ANKUB1A6NFN9 424 aa3.32□□□□□ -1.88
AC009961.3-201ENST00000449832 ANKRD61A6NGH8 418 aa3.32□□□□□ -1.88
AC009961.3-201ENST00000449832 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.32□□□□□ -1.88
AC009961.3-201ENST00000449832 TOMM70O94826 608 aa3.32□□□□□ -1.88
AC009961.3-201ENST00000449832 PTMSP20962 102 aa3.32□□□□□ -1.88
AC009961.3-201ENST00000449832 ARSEP51690 589 aa3.32□□□□□ -1.88
AC009961.3-201ENST00000449832 PDX1P52945 283 aa3.32□□□□□ -1.88
AC009961.3-201ENST00000449832 GSCP56915 257 aaPredicted RBP3.32□□□□□ -1.88
AC009961.3-201ENST00000449832 RIPK4P57078 832 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms