RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ZBTB14O43829 449 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 KIF1CO43896 1103 aaKnown RBP13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 DXOO77932 396 aaKnown RBP13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 CHRM5P08912 532 aaPredicted RBP13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 CCL4P13236 92 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 ITIH1P19827 911 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 FDXRP22570 491 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 DEKP35659 375 aaKnown RBP13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 ERVPABLB-1P60509 514 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 IL2P60568 153 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 PPP1CAP62136 330 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 TUBB4BP68371 445 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 NAB1Q13506 487 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 GRTP1Q5TC63 336 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 PAQR3Q6TCH7 311 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 IGF2-ASQ6U949 168 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 PIWIL4Q7Z3Z4 852 aaKnown RBP13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 CARFQ8N187 725 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 MAP3K3Q99759 626 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 CDC42EP4Q9H3Q1 356 aaKnown RBP13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 SLC39A1Q9NY26 324 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 ACTR10Q9NZ32 417 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 NINJ2Q9NZG7 142 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 DKK4Q9UBT3 224 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 CIDEBQ9UHD4 219 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 LNPEPQ9UIQ6 1025 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 POMT2Q9UKY4 750 aa13.59□□□□□ -0.23
GTF3C3-206ENST00000448539 PMS2P1A4D2B8 440 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 ZNF839A8K0R7 811 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 ISM1B1AKI9 464 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 RASGRF2O14827 1237 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 PSIP1O75475 530 aaKnown RBP13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 ACSL3O95573 720 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 ZBTB11O95625 1053 aaPredicted RBP13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 SYF2O95926 243 aaKnown RBP13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 CAPNS1P04632 268 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 FGF3P11487 239 aaPredicted RBP13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 PRDX3P30048 256 aaKnown RBP13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 ECHS1P30084 290 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 PKLRP30613 574 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 SPRP35270 261 aaPredicted RBP13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 KPNA2P52292 529 aaKnown RBP13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 RAB15P59190 212 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 TIAL1Q01085 375 aaKnown RBP eCLIP13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 POU4F1Q01851 419 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 KIR2DS3Q14952 304 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 TBC1D25Q3MII6 688 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 CYB5D1Q6P9G0 228 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 KMT5CQ86Y97 462 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 ADGRF3Q8IZF5 1079 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 OR9A1PQ8NGU1 263 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 OR2L8Q8NGY9 312 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 EEF1AKMT1Q8WVE0 214 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 ASB11Q8WXH4 323 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 USP7Q93009 1102 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 SLC22A18Q96BI1 424 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 LINGO1Q96FE5 620 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 TSPAN17Q96FV3 270 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 PRR11Q96HE9 360 aaPredicted RBP13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 TAAR9Q96RI9 348 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 CYTH2Q99418 400 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 NRTNQ99748 197 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 OLFM1Q99784 485 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 C1GALT1Q9NS00 363 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 OCIAD1Q9NX40 245 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 SOHLH2Q9NX45 425 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 SPATA7Q9P0W8 599 aa13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 COL27A1Q8IZC6 1860 aaPredicted RBP13.58□□□□□ -0.24
GTF3C3-206ENST00000448539 IGHV5-51A0A0C4DH38 117 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 ARHGEF33A8MVX0 844 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 B4E171 279 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 TAF4O00268 1085 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 C8GP07360 202 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 TPBGLP0DKB5 382 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 NELFEP18615 380 aaKnown RBP13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 CYP2A7P20853 494 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 HSD17B2P37059 387 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 ETV5P41161 510 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 TSPAN7P41732 249 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 MC2RQ01718 297 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 FOXM1Q08050 763 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 USP10Q14694 798 aaKnown RBP13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 TMTC4Q5T4D3 741 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 DCAF12Q5T6F0 453 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 ANKS6Q68DC2 871 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 SPESP1Q6UW49 350 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 CYHR1Q6ZMK1 362 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 UBE2R2Q712K3 238 aaPredicted RBP13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 TAX1BP1Q86VP1 789 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 NKAPQ8N5F7 415 aaKnown RBP13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 C2orf73Q8N5S3 287 aaPredicted RBP13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 MCOLN3Q8TDD5 553 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 KLHL6Q8WZ60 621 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 FGF11Q92914 225 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 IL17FQ96PD4 163 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 RBBP8Q99708 897 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 SYTL2Q9HCH5 934 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 ASCL3Q9NQ33 180 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 PCDHB11Q9Y5F2 797 aa13.57□□□□□ -0.24
GTF3C3-206ENST00000448539 PCDHGA7Q9Y5G6 932 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms