RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SLC19A1P41440 591 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 AGTR2P50052 363 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 GNGT1P63211 74 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 BNIP3Q12983 259 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 STX3Q13277 289 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 KIR2DS5Q14953 304 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 C18orf21Q32NC0 220 aaPredicted RBP18.98■□□□□ 0.63
SGCE-207ENST00000447873 TUBB8Q3ZCM7 444 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 ZNF678Q5SXM1 525 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 LAIR1Q6GTX8 287 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 NAGSQ8N159 534 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 PPP4R1Q8TF05 950 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 ESAMQ96AP7 390 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 FBXL8Q96CD0 374 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 L3HYPDHQ96EM0 354 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 NUSAP1Q9BXS6 441 aaKnown RBP18.98■□□□□ 0.63
SGCE-207ENST00000447873 CCDC134Q9H6E4 229 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 ACSS2Q9NR19 701 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 STOX2Q9P2F5 926 aaPredicted RBP18.98■□□□□ 0.63
SGCE-207ENST00000447873 LNPEPQ9UIQ6 1025 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 ARHGAP33O14559 1287 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 KLF11O14901 512 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 TAPBPO15533 448 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 KDM1AO60341 852 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 XRCC1P18887 633 aaPredicted RBP18.98■□□□□ 0.63
SGCE-207ENST00000447873 HSPA7P48741 367 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 BST1Q10588 318 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 TCF15Q12870 199 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 GRB7Q14451 532 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 SHBQ15464 509 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 CCDC6Q16204 474 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 DEFB133Q30KQ1 61 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 AGTRAPQ6RW13 159 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 SFRP1Q8N474 314 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 RAB42Q8N4Z0 105 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 PRSS33Q8NF86 280 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 PATE1Q8WXA2 126 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 MOCOSQ96EN8 888 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 CAMK1GQ96NX5 476 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 TMEM79Q9BSE2 394 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 ATG10Q9H0Y0 220 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 GAREM1Q9H706 876 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 PLAGL1Q9UM63 463 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 CSNK1G3Q9Y6M4 447 aa18.98■□□□□ 0.63
SGCE-207ENST00000447873 DNAH14Q0VDD8 3507 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 CABIN1Q9Y6J0 2220 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 PCDH15Q96QU1 1955 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 PRAMEF33A0A0G2JMD5 474 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 LRRC14BA6NHZ5 514 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 TCP11X1B4DZS4 312 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 YKT6O15498 198 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 CER1O95813 267 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 VIPP01282 170 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 IMPA1P29218 277 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 EPHA8P29322 1005 aaPredicted RBP18.97■□□□□ 0.63
SGCE-207ENST00000447873 GGT5P36269 586 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 PCBP2Q15366 365 aaKnown RBP eCLIP18.97■□□□□ 0.63
SGCE-207ENST00000447873 UNC50Q53HI1 259 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 ANKS6Q68DC2 871 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 RGS9BPQ6ZS82 235 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 SFTPA2Q8IWL1 248 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 SYTL1Q8IYJ3 562 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 SLC25A45Q8N413 288 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 OR6Y1Q8NGX8 325 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 SLC37A2Q8TED4 501 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 UBTD2Q8WUN7 234 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 ZNF480Q8WV37 535 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 C1QTNF3Q9BXJ4 246 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 CD244Q9BZW8 370 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 POT1Q9NUX5 634 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 CPNE7Q9UBL6 633 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 GMEB2Q9UKD1 530 aa18.97■□□□□ 0.63
SGCE-207ENST00000447873 RALGAPA1Q6GYQ0 2036 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 KHNYNO15037 678 aaKnown RBP18.96■□□□□ 0.63
SGCE-207ENST00000447873 CCNT2O60583 730 aaKnown RBP18.96■□□□□ 0.63
SGCE-207ENST00000447873 STK16O75716 305 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 RPS17P08708 135 aaKnown RBP18.96■□□□□ 0.63
SGCE-207ENST00000447873 LSP1P33241 339 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 HSD17B2P37059 387 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 GDF5P43026 501 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 PNLIPRP1P54315 467 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 NAA20P61599 178 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 CES4AQ5XG92 561 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 SLC9B2Q86UD5 537 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 MAPK15Q8TD08 544 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 CNDP1Q96KN2 507 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 SMOC1Q9H4F8 434 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 KIR3DX1Q9H7L2 352 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 SLC40A1Q9NP59 571 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 SPATA7Q9P0W8 599 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 ASB1Q9Y576 335 aa18.96■□□□□ 0.63
SGCE-207ENST00000447873 TMEM114B3SHH9 223 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 NPHS1O60500 1241 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 SERPINB5P36952 375 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 SLC6A12P48065 614 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 SLC1A6P48664 564 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 NAE1Q13564 534 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 RCN2Q14257 317 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 ARHGAP19Q14CB8 494 aa18.95■□□□□ 0.62
SGCE-207ENST00000447873 ZXDCQ2QGD7 858 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms