RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SLC17A7Q9P2U7 560 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 LRIT1Q9P2V4 623 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 POLG2Q9UHN1 485 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 OARD1Q9Y530 152 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 ACTL7BQ9Y614 415 aa17.48■□□□□ 0.39
TRAPPC4-203ENST00000447216 MYO1CO00159 1063 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 TYROBPO43914 113 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 LDOC1O95751 146 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 RBP1P09455 135 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 SBK3P0C264 359 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 KPNA2P52292 529 aaKnown RBP17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 DAB2P98082 770 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 PLCL1Q15111 1095 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 LCA5Q86VQ0 697 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 TMEM151AQ8N4L1 468 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 C2orf73Q8N5S3 287 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 FBXO15Q8NCQ5 510 aaPredicted RBP17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 MAGEC3Q8TD91 643 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 TCP10LQ8TDR4 215 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 DENND1AQ8TEH3 1009 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 CCDC74AQ96AQ1 378 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 RAD51AP1Q96B01 352 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 ALKBH8Q96BT7 664 aaKnown RBP17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 MRPL57Q9BQC6 102 aaKnown RBP17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 TRIM54Q9BYV2 358 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 IQCGQ9H095 443 aaKnown RBP17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 MRPL46Q9H2W6 279 aaKnown RBP17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 ARL15Q9NXU5 204 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 GRID1Q9ULK0 1009 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 ICKQ9UPZ9 632 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 PLLPQ9Y342 182 aa17.47■□□□□ 0.39
TRAPPC4-203ENST00000447216 PABPN1LA6NDY0 278 aaKnown RBP17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 PLIN3O60664 434 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 PROCP04070 461 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 ENO2P09104 434 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 HIST1H2AGP0C0S8 130 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 HIST1H2ADP20671 130 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 RPA3P35244 121 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 MPP2Q14168 576 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 TGFBIQ15582 683 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 C18orf21Q32NC0 220 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 FBXO48Q5FWF7 155 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 PERM1Q5SV97 790 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 EFL1Q7Z2Z2 1120 aaKnown RBP17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 Q8N9G6 341 aaPredicted RBP17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 AVL9Q8NBF6 648 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 OR4E2Q8NGC2 313 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 RHEBL1Q8TAI7 183 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 LCN9Q8WX39 176 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 HIST1H2AHQ96KK5 128 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 FAM111AQ96PZ2 611 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 SLC38A3Q99624 504 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 HIST1H2AJQ99878 128 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 EGFL8Q99944 293 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 H2AFJQ9BTM1 129 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 MENTQ9BUN1 341 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 CD274Q9NZQ7 290 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 FTSJ1Q9UET6 329 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 HEATR5BQ9P2D3 2071 aa17.46■□□□□ 0.39
TRAPPC4-203ENST00000447216 HMGB1P1B2RPK0 211 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 TARM1B6A8C7 271 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 CASC3O15234 703 aaKnown RBP17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 NUDT21O43809 227 aaKnown RBP17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 SLC16A8O95907 504 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 CKMT1AP12532 417 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 MTHFD2P13995 350 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 GLB1P16278 677 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 IMPA1P29218 277 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 PKLRP30613 574 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 OR1D5P58170 312 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 TAX1BP1Q86VP1 789 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 RBM12BQ8IXT5 1001 aaKnown RBP17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 ANKRD42Q8N9B4 389 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 CCDC63Q8NA47 563 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 PPFIBP2Q8ND30 876 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 ARMC2Q8NEN0 867 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 ZFPM2Q8WW38 1151 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 SH3KBP1Q96B97 665 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 CCDC138Q96M89 665 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 SELENOSQ9BQE4 189 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 RDH14Q9HBH5 336 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 SSU72Q9NP77 194 aaKnown RBP17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 NUDT4Q9NZJ9 180 aa17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 STOX2Q9P2F5 926 aaPredicted RBP17.45■□□□□ 0.38
TRAPPC4-203ENST00000447216 EME2A4GXA9 379 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC4-203ENST00000447216 LILRA5A6NI73 299 aa17.44■□□□□ 0.38
TRAPPC4-203ENST00000447216 H3BQF6 201 aa17.44■□□□□ 0.38
TRAPPC4-203ENST00000447216 PRPF4O43172 522 aaKnown RBP eCLIP17.44■□□□□ 0.382e-7■■■■□ 24.1
TRAPPC4-203ENST00000447216 CBFA2T3O75081 653 aa17.44■□□□□ 0.38
TRAPPC4-203ENST00000447216 S100BP04271 92 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC4-203ENST00000447216 TYRP1P17643 537 aa17.44■□□□□ 0.38
TRAPPC4-203ENST00000447216 ALDH4A1P30038 563 aa17.44■□□□□ 0.38
TRAPPC4-203ENST00000447216 HPDP32754 393 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC4-203ENST00000447216 PPM1FP49593 454 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC4-203ENST00000447216 AP1S2P56377 157 aa17.44■□□□□ 0.38
TRAPPC4-203ENST00000447216 CDKL1Q00532 357 aa17.44■□□□□ 0.38
TRAPPC4-203ENST00000447216 TSTA3Q13630 321 aaPredicted RBP17.44■□□□□ 0.38
TRAPPC4-203ENST00000447216 FASTKQ14296 549 aaKnown RBP17.44■□□□□ 0.38
TRAPPC4-203ENST00000447216 ZNF438Q7Z4V0 828 aa17.44■□□□□ 0.38
TRAPPC4-203ENST00000447216 PIP4P1Q86T03 277 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms