RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 GPR150Q8NGU9 434 aa11.62□□□□□ -0.55
MSH6-204ENST00000445503 CORINQ9Y5Q5 1042 aa11.62□□□□□ -0.55
MSH6-204ENST00000445503 E2F3O00716 465 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 ZSCAN9O15535 394 aaPredicted RBP11.61□□□□□ -0.55
MSH6-204ENST00000445503 KRT8P05787 483 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 PRKAR2AP13861 404 aaKnown RBP11.61□□□□□ -0.55
MSH6-204ENST00000445503 CD36P16671 472 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 CRHBPP24387 322 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 NCS1P62166 190 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 RFX4Q33E94 735 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 BEND5Q7L4P6 421 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 DEFB128Q7Z7B8 93 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 GOLM1Q8NBJ4 401 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 COPS8Q99627 209 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 SACM1LQ9NTJ5 587 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 DUSP12Q9UNI6 340 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 DHRS7Q9Y394 339 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 WASH4PA8MWX3 477 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 FAM155AB1AL88 458 aaPredicted RBP11.61□□□□□ -0.55
MSH6-204ENST00000445503 CNOT3O75175 753 aaKnown RBP11.61□□□□□ -0.55
MSH6-204ENST00000445503 FUCA1P04066 466 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 ALPLP05186 524 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 C7P10643 843 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 ZNF140P52738 457 aaPredicted RBP11.61□□□□□ -0.55
MSH6-204ENST00000445503 FCGRTP55899 365 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 USP41Q3LFD5 358 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 XKR6Q5GH73 641 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 COLEC12Q5KU26 742 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 CAPSLQ8WWF8 208 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 PPP1R14BQ96C90 147 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 INPP5KQ9BT40 448 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 LSM7Q9UK45 103 aaKnown RBP11.61□□□□□ -0.55
MSH6-204ENST00000445503 ASPDHA6ND91 283 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 GLTPD2A6NH11 291 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 MANBAO00462 879 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 ZNF197O14709 1029 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 OPN1SWP03999 348 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 BCKDHAP12694 445 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 DCTP40126 519 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 CTBSQ01459 385 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 SLC14A2Q15849 920 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 CTSL3PQ5NE16 218 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 CERS6Q6ZMG9 384 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 RBM12BQ8IXT5 1001 aaKnown RBP11.61□□□□□ -0.55
MSH6-204ENST00000445503 PCSK9Q8NBP7 692 aaKnown RBP11.61□□□□□ -0.55
MSH6-204ENST00000445503 CHDHQ8NE62 594 aaPredicted RBP11.61□□□□□ -0.55
MSH6-204ENST00000445503 NELL1Q92832 810 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 PYURFQ96I23 114 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 ZNF583Q96ND8 569 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 DPH2Q9BQC3 489 aaPredicted RBP11.61□□□□□ -0.55
MSH6-204ENST00000445503 TTPALQ9BTX7 342 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 ZDHHC6Q9H6R6 413 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 AASDHPPTQ9NRN7 309 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 TMEM161AQ9NX61 479 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 OGDHLQ9ULD0 1010 aa11.61□□□□□ -0.55
MSH6-204ENST00000445503 SAMD4AQ9UPU9 718 aaKnown RBP11.61□□□□□ -0.55
MSH6-204ENST00000445503 KDELR3O43731 214 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 UGT2B11O75310 529 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 TUFMP49411 452 aaKnown RBP11.6□□□□□ -0.55
MSH6-204ENST00000445503 GRIK2Q13002 908 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 VTCN1Q7Z7D3 282 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 PHYKPLQ8IUZ5 450 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 COLGALT2Q8IYK4 626 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 DUS3LQ96G46 650 aaKnown RBP11.6□□□□□ -0.55
MSH6-204ENST00000445503 KCNC2Q96PR1 638 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 TSEN34Q9BSV6 310 aaKnown RBP11.6□□□□□ -0.55
MSH6-204ENST00000445503 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.6□□□□□ -0.554e-8■■□□□ 12.3
MSH6-204ENST00000445503 SCHIP1Q9P0W5 487 aaPredicted RBP11.6□□□□□ -0.55
MSH6-204ENST00000445503 RAPGEFL1Q9UHV5 662 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 MT-ND2P03891 347 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 FABP3P05413 133 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 PFKLP17858 780 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 FSHRP23945 695 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 CSKP41240 450 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 SMN1Q16637 294 aaKnown RBP11.6□□□□□ -0.55
MSH6-204ENST00000445503 MRPL10Q7Z7H8 261 aaKnown RBP11.6□□□□□ -0.55
MSH6-204ENST00000445503 SLC22A16Q86VW1 577 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 OR13F1Q8NGS4 319 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 NDNFQ8TB73 568 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 SLC22A17Q8WUG5 538 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 TRUB1Q8WWH5 349 aaKnown RBP11.6□□□□□ -0.55
MSH6-204ENST00000445503 S100ZQ8WXG8 99 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 TUBA1CQ9BQE3 449 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 MAGEE1Q9HCI5 957 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 PRDM8Q9NQV8 689 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 ZNF225Q9UK10 706 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 PCDHB14Q9Y5E9 798 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 FER1L6Q2WGJ9 1857 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 DLGAP1O14490 977 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 OR56A5P0C7T3 313 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 PORP16435 677 aaPredicted RBP11.6□□□□□ -0.55
MSH6-204ENST00000445503 ENGP17813 658 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 ADARB1P78563 741 aaKnown RBP11.6□□□□□ -0.55
MSH6-204ENST00000445503 CSTF3Q12996 717 aaKnown RBP11.6□□□□□ -0.55
MSH6-204ENST00000445503 CHIT1Q13231 466 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 USP39Q53GS9 565 aaKnown RBP11.6□□□□□ -0.55
MSH6-204ENST00000445503 ZFP90Q8TF47 636 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 CHCHD6Q9BRQ6 235 aa11.6□□□□□ -0.55
MSH6-204ENST00000445503 C2orf49Q9BVC5 232 aaPredicted RBP11.6□□□□□ -0.55
MSH6-204ENST00000445503 STARD7Q9NQZ5 370 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms