RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 TRIT1Q9H3H1 467 aaKnown RBP16.75■□□□□ 0.27
LIME1-202ENST00000444951 CPNE7Q9UBL6 633 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 PLAGL1Q9UM63 463 aa16.75■□□□□ 0.27
LIME1-202ENST00000444951 LY6G6EA0A0G2JKS1 128 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 MAP2K7O14733 419 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 SPAG7O75391 227 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 KLHL2O95198 593 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 MATN4O95460 622 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 CATP04040 527 aaKnown RBP16.74■□□□□ 0.27
LIME1-202ENST00000444951 CD1DP15813 335 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 TFEBP19484 476 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 MAP4P27816 1152 aaKnown RBP16.74■□□□□ 0.27
LIME1-202ENST00000444951 PPM1FP49593 454 aaPredicted RBP16.74■□□□□ 0.27
LIME1-202ENST00000444951 DAB2P98082 770 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 HHEXQ03014 270 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 RTP5Q14D33 572 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 NR0B2Q15466 257 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 CCSMST1Q4G0I0 132 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 TTC23LQ6PF05 361 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 OGFOD3Q6PK18 319 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 UNC5DQ6UXZ4 953 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 CCDC91Q7Z6B0 441 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 GOLGA6L1Q8N7Z2 621 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 GPR156Q8NFN8 814 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 ACMSDQ8TDX5 336 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 ASB11Q8WXH4 323 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 UBXN10Q96LJ8 280 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 DERL2Q9GZP9 239 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 ACBD3Q9H3P7 528 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 ALG9Q9H6U8 611 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 NMRAL1Q9HBL8 299 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 TMBIM4Q9HC24 238 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 UTP6Q9NYH9 597 aaKnown RBP16.74■□□□□ 0.27
LIME1-202ENST00000444951 PADI4Q9UM07 663 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 NOVA2Q9UNW9 492 aaKnown RBP16.74■□□□□ 0.27
LIME1-202ENST00000444951 HEBP2Q9Y5Z4 205 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 COLEC10Q9Y6Z7 277 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 U3KQA8 63 aa16.74■□□□□ 0.27
LIME1-202ENST00000444951 CPED1A4D0V7 1026 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 PABPN1LA6NDY0 278 aaKnown RBP16.73■□□□□ 0.27
LIME1-202ENST00000444951 RHPN2P1A8MT19 583 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 ARHGEF33A8MVX0 844 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 COPEO14579 308 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 C1orf105O95561 183 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 RPN2P04844 631 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 C8GP07360 202 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 CDK4P11802 303 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 XRCC1P18887 633 aaPredicted RBP16.73■□□□□ 0.27
LIME1-202ENST00000444951 ATP6V0D1P61421 351 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 ILKQ13418 452 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 PLCL1Q15111 1095 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 OR4D1Q15615 310 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 C16orf46Q6P387 395 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 KLC3Q6P597 504 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 FRA10AC1Q70Z53 315 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 CNPY4Q8N129 248 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 DCBLD1Q8N8Z6 715 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 PTERQ96BW5 349 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 PGM2Q96G03 612 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 PDLIM5Q96HC4 596 aaKnown RBP16.73■□□□□ 0.27
LIME1-202ENST00000444951 SMC6Q96SB8 1091 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 NRTNQ99748 197 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 STN1Q9H668 368 aaKnown RBP16.73■□□□□ 0.27
LIME1-202ENST00000444951 MVB12BQ9H7P6 319 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 RNF112Q9ULX5 631 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 AK5Q9Y6K8 562 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 RNF215Q9Y6U7 377 aa16.73■□□□□ 0.27
LIME1-202ENST00000444951 COL27A1Q8IZC6 1860 aaPredicted RBP16.72■□□□□ 0.27
LIME1-202ENST00000444951 PPM1DO15297 605 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 OPA1O60313 960 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 PSIP1O75475 530 aaKnown RBP16.72■□□□□ 0.27
LIME1-202ENST00000444951 GUCA1CO95843 209 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 CREB1P16220 341 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 CYP2A7P20853 494 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 SLC26A3P40879 764 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 EIF2S3P41091 472 aaKnown RBP16.72■□□□□ 0.27
LIME1-202ENST00000444951 MAPK9P45984 424 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 RPIAP49247 311 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 UBE2IP63279 158 aaKnown RBP16.72■□□□□ 0.27
LIME1-202ENST00000444951 GPR18Q14330 331 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 PHKG1Q16816 387 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.72■□□□□ 0.27
LIME1-202ENST00000444951 CLEC14AQ86T13 490 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 DCUN1D3Q8IWE4 304 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 TBC1D21Q8IYX1 336 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 Q8N9G6 341 aaPredicted RBP16.72■□□□□ 0.27
LIME1-202ENST00000444951 LMNTD1Q8N9Z9 388 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 OR5K2Q8NHB8 316 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 DLG3Q92796 817 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 ARL8AQ96BM9 186 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 NRSN2Q9GZP1 204 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 STMN4Q9H169 189 aaPredicted RBP16.72■□□□□ 0.27
LIME1-202ENST00000444951 C12orf65Q9H3J6 166 aaKnown RBP16.72■□□□□ 0.27
LIME1-202ENST00000444951 XKR8Q9H6D3 395 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 SLC40A1Q9NP59 571 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 POT1Q9NUX5 634 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.72■□□□□ 0.27
LIME1-202ENST00000444951 LRIT1Q9P2V4 623 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 CLCA2Q9UQC9 943 aa16.72■□□□□ 0.27
LIME1-202ENST00000444951 ARHGEF17Q96PE2 2063 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms