RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 COILP38432 576 aaPredicted RBP10.5□□□□□ -0.73
SF3A1-203ENST00000444440 CCR10P46092 362 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 BDKRB1P46663 353 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 EIF3BP55884 814 aaKnown RBP10.5□□□□□ -0.73
SF3A1-203ENST00000444440 FOXL2P58012 376 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 GPS1Q13098 491 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 CYP1B1Q16678 543 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 KYNUQ16719 465 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 TYSND1Q2T9J0 566 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 PTCHD3Q3KNS1 767 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 CPZQ66K79 652 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 FAM198BQ6UWH4 519 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 CENPUQ71F23 418 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 TAX1BP1Q86VP1 789 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 BPHLQ86WA6 291 aaPredicted RBP10.5□□□□□ -0.73
SF3A1-203ENST00000444440 LPGAT1Q92604 370 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 MR1Q95460 341 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 MAGOHBQ96A72 148 aaKnown RBP10.5□□□□□ -0.73
SF3A1-203ENST00000444440 FAM136AQ96C01 138 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 ABHD17AQ96GS6 310 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 MRM3Q9HC36 420 aaKnown RBP10.5□□□□□ -0.73
SF3A1-203ENST00000444440 BFARQ9NZS9 450 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 TSR3Q9UJK0 312 aaKnown RBP10.5□□□□□ -0.73
SF3A1-203ENST00000444440 PCDHB3Q9Y5E6 796 aa10.5□□□□□ -0.73
SF3A1-203ENST00000444440 UBR5O95071 2799 aaPredicted RBP10.5□□□□□ -0.73
SF3A1-203ENST00000444440 SPTA1P02549 2419 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 A0A0J9YY10 115 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 C21orf140B9A014 251 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 GOLGA8MH3BSY2 632 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 MEN1O00255 615 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 CES2O00748 559 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 ZNF749O43361 778 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 NRP2O60462 931 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 MT-ND3P03897 115 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 MSL3P1P0C860 447 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 RPS3P23396 243 aaKnown RBP eCLIP10.49□□□□□ -0.737e-10■■■■□ 20.3
SF3A1-203ENST00000444440 PSMB5P28074 263 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 PTPN4P29074 926 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 TTPAP49638 278 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 MC1RQ01726 317 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 CHAF1BQ13112 559 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 GBX1Q14549 363 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 TMTC4Q5T4D3 741 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 CYB5D1Q6P9G0 228 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 ZNF449Q6P9G9 518 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 SYTL1Q8IYJ3 562 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 ENDOVQ8N8Q3 282 aaKnown RBP10.49□□□□□ -0.73
SF3A1-203ENST00000444440 OR8K5Q8NH50 307 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 ADAMTS17Q8TE56 1095 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 DENND1AQ8TEH3 1009 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 ASZ1Q8WWH4 475 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 LRFN5Q96NI6 719 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 OSBPL9Q96SU4 736 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 SLC30A3Q99726 388 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 FAM117AQ9C073 453 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 SPRTNQ9H040 489 aaPredicted RBP10.49□□□□□ -0.73
SF3A1-203ENST00000444440 ACTR5Q9H9F9 607 aaPredicted RBP10.49□□□□□ -0.73
SF3A1-203ENST00000444440 OR6C2Q9NZP2 312 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 POLG2Q9UHN1 485 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 KCND3Q9UK17 655 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 TP53TG5Q9Y2B4 290 aa10.49□□□□□ -0.73
SF3A1-203ENST00000444440 GOLGA6L10A0A0M3HER8 536 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 ZCWPW2A0A1B0GU75 182 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 ISM1B1AKI9 464 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 PGRMC1O00264 195 aaKnown RBP10.48□□□□□ -0.73
SF3A1-203ENST00000444440 PRICKLE3O43900 615 aaPredicted RBP10.48□□□□□ -0.73
SF3A1-203ENST00000444440 BANF1O75531 89 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 CBSLP0DN79 551 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 MAGP20916 626 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 FMO4P31512 558 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 CBSP35520 551 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 MAGEA3P43357 314 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 ITGA1P56199 1179 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 YBX1P67809 324 aaKnown RBP10.48□□□□□ -0.73
SF3A1-203ENST00000444440 SARNPP82979 210 aaKnown RBP10.48□□□□□ -0.73
SF3A1-203ENST00000444440 CDK16Q00536 496 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 UGT8Q16880 541 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 DNAJC21Q5F1R6 531 aaKnown RBP10.48□□□□□ -0.73
SF3A1-203ENST00000444440 AARS2Q5JTZ9 985 aaKnown RBP10.48□□□□□ -0.73
SF3A1-203ENST00000444440 IZUMO3Q5VZ72 239 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 PTRHD1Q6GMV3 140 aaKnown RBP10.48□□□□□ -0.73
SF3A1-203ENST00000444440 KIAA0930Q6ICG6 404 aaPredicted RBP10.48□□□□□ -0.73
SF3A1-203ENST00000444440 CCDC137Q6PK04 289 aaKnown RBP10.48□□□□□ -0.73
SF3A1-203ENST00000444440 UNC5DQ6UXZ4 953 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 DNAJC22Q8N4W6 341 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 OTUD6BQ8N6M0 293 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 NAT8LQ8N9F0 302 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 APOBEC4Q8WW27 367 aaKnown RBP10.48□□□□□ -0.73
SF3A1-203ENST00000444440 CLIP3Q96DZ5 547 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 SERPINB12Q96P63 405 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 TTC1Q99614 292 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 EPN3Q9H201 632 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 GNPTGQ9UJJ9 305 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 TUBD1Q9UJT1 453 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 ANAPC5Q9UJX4 755 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 POLHQ9Y253 713 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 FARSAQ9Y285 508 aaKnown RBP10.48□□□□□ -0.73
SF3A1-203ENST00000444440 CRYL1Q9Y2S2 319 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 MED16Q9Y2X0 877 aa10.48□□□□□ -0.73
SF3A1-203ENST00000444440 ASH1LQ9NR48 2969 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms