RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 NRXN3Q9Y4C0 1643 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 TCRBV21S2A2A0A5A6 115 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 PLK4O00444 970 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 TNFRSF10BO14763 440 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 NPHS1O60500 1241 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 HEXBP07686 556 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 SRPRAP08240 638 aaKnown RBP11.01□□□□□ -0.65
FN1-211ENST00000443816 CHN2P52757 468 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 CACNA2D1P54289 1103 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 AP1S2P56377 157 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 SLC25A3Q00325 362 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 ZNF852Q6ZMS4 543 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 CMTM8Q8IZV2 173 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 ANKFN1Q8N957 763 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 C17orf62Q9BQA9 187 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 LRMDAQ9H2I8 198 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 CHMP1AQ9HD42 196 aaPredicted RBP11.01□□□□□ -0.65
FN1-211ENST00000443816 SMCHD1A6NHR9 2005 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 CCDC162PA2VCL2 907 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 TNFRSF11BO00300 401 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 BMP6P22004 513 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 CDK9P50750 372 aaKnown RBP11.01□□□□□ -0.65
FN1-211ENST00000443816 CYP2U1Q7Z449 544 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 CAPSLQ8WWF8 208 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 TFAP2BQ92481 460 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 CDCA3Q99618 268 aaPredicted RBP11.01□□□□□ -0.65
FN1-211ENST00000443816 ELAC1Q9H777 363 aaKnown RBP11.01□□□□□ -0.65
FN1-211ENST00000443816 C1orf109Q9NX04 203 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 KLRF1Q9NZS2 232 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 MTRF1O75570 445 aaKnown RBP11.01□□□□□ -0.65
FN1-211ENST00000443816 UGT1A1P22309 533 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 ACVR2AP27037 513 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 GPR17Q13304 367 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 CCDC28BQ9BUN5 200 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 TTYH3Q9C0H2 523 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 TIMM22Q9Y584 194 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 MIA3Q5JRA6 1907 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 MMP20O60882 483 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 NME6O75414 186 aaPredicted RBP11.01□□□□□ -0.65
FN1-211ENST00000443816 ALOX5P09917 674 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 PRKAR1AP10644 381 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 ZNF3P17036 446 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 KCNJ5P48544 419 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 SIRPB2Q5JXA9 342 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 KIAA0930Q6ICG6 404 aaPredicted RBP11.01□□□□□ -0.65
FN1-211ENST00000443816 SLC34A3Q8N130 599 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 DEFB119Q8N690 84 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 EMID1Q96A84 441 aaPredicted RBP11.01□□□□□ -0.65
FN1-211ENST00000443816 CPNE2Q96FN4 548 aaPredicted RBP11.01□□□□□ -0.65
FN1-211ENST00000443816 RIOK2Q9BVS4 552 aaKnown RBP11.01□□□□□ -0.65
FN1-211ENST00000443816 ANKRD66B4E2M5 251 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 MAGEA11P43364 429 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 SRP54P61011 504 aaKnown RBP11.01□□□□□ -0.65
FN1-211ENST00000443816 NXPE1Q8N323 547 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 ZNF641Q96N77 438 aaPredicted RBP11.01□□□□□ -0.65
FN1-211ENST00000443816 CAMK1GQ96NX5 476 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 GLS2Q9UI32 602 aa11.01□□□□□ -0.65
FN1-211ENST00000443816 PRR5-ARHGAP8B1AHC4 643 aa11□□□□□ -0.65
FN1-211ENST00000443816 PMM2O15305 246 aa11□□□□□ -0.65
FN1-211ENST00000443816 TMEM44Q2T9K0 475 aa11□□□□□ -0.65
FN1-211ENST00000443816 ARSJQ5FYB0 599 aaPredicted RBP11□□□□□ -0.65
FN1-211ENST00000443816 LRRC70Q7Z2Q7 622 aa11□□□□□ -0.65
FN1-211ENST00000443816 KCT2Q8NC54 265 aa11□□□□□ -0.65
FN1-211ENST00000443816 TSEN2Q8NCE0 465 aaKnown RBP11□□□□□ -0.65
FN1-211ENST00000443816 FOXJ1Q92949 421 aa11□□□□□ -0.65
FN1-211ENST00000443816 MPP4Q96JB8 637 aa11□□□□□ -0.65
FN1-211ENST00000443816 EPYCQ99645 322 aa11□□□□□ -0.65
FN1-211ENST00000443816 PAIP1Q9H074 479 aaKnown RBP11□□□□□ -0.65
FN1-211ENST00000443816 FBRSQ9HAH7 460 aa11□□□□□ -0.65
FN1-211ENST00000443816 PLGRKTQ9HBL7 147 aa11□□□□□ -0.65
FN1-211ENST00000443816 MKKSQ9NPJ1 570 aaPredicted RBP11□□□□□ -0.65
FN1-211ENST00000443816 SPATA7Q9P0W8 599 aa11□□□□□ -0.65
FN1-211ENST00000443816 P2RX2Q9UBL9 471 aa11□□□□□ -0.65
FN1-211ENST00000443816 CA14Q9ULX7 337 aa11□□□□□ -0.65
FN1-211ENST00000443816 MAST2Q6P0Q8 1798 aa11□□□□□ -0.65
FN1-211ENST00000443816 PCDH7O60245 1069 aa11□□□□□ -0.65
FN1-211ENST00000443816 RHOP08100 348 aa11□□□□□ -0.65
FN1-211ENST00000443816 HAPLN1P10915 354 aaPredicted RBP11□□□□□ -0.65
FN1-211ENST00000443816 CYP4B1P13584 511 aa11□□□□□ -0.65
FN1-211ENST00000443816 MAPK11Q15759 364 aa11□□□□□ -0.65
FN1-211ENST00000443816 TRABD2AQ86V40 505 aa11□□□□□ -0.65
FN1-211ENST00000443816 MFSD3Q96ES6 412 aa11□□□□□ -0.65
FN1-211ENST00000443816 EFCAB11Q9BUY7 163 aa11□□□□□ -0.65
FN1-211ENST00000443816 METTL7AQ9H8H3 244 aa11□□□□□ -0.65
FN1-211ENST00000443816 EIF2B4Q9UI10 523 aaKnown RBP11□□□□□ -0.65
FN1-211ENST00000443816 SNX3O60493 162 aa11□□□□□ -0.65
FN1-211ENST00000443816 TIMP1P01033 207 aa11□□□□□ -0.65
FN1-211ENST00000443816 PRKCHP24723 683 aa11□□□□□ -0.65
FN1-211ENST00000443816 MPSTP25325 297 aa11□□□□□ -0.65
FN1-211ENST00000443816 RABGGTBP53611 331 aa11□□□□□ -0.65
FN1-211ENST00000443816 FATE1Q969F0 183 aa11□□□□□ -0.65
FN1-211ENST00000443816 MTERF1Q99551 399 aaKnown RBP11□□□□□ -0.65
FN1-211ENST00000443816 TFB2MQ9H5Q4 396 aaKnown RBP11□□□□□ -0.65
FN1-211ENST00000443816 PNPOQ9NVS9 261 aa11□□□□□ -0.65
FN1-211ENST00000443816 DOCK2Q92608 1830 aa11□□□□□ -0.65
FN1-211ENST00000443816 PRAMEF12O95522 483 aa11□□□□□ -0.65
FN1-211ENST00000443816 IL33O95760 270 aa11□□□□□ -0.65
FN1-211ENST00000443816 IGFBP5P24593 272 aa11□□□□□ -0.65
FN1-211ENST00000443816 CCNHP51946 323 aaPredicted RBP11□□□□□ -0.65
FN1-211ENST00000443816 RPL26P61254 145 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms