RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 CLDN24A6NM45 220 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 CTDSP2O14595 271 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 EEDO75530 441 aaKnown RBP16.45■□□□□ 0.22
PMS1-213ENST00000441310 ZNF37AP17032 561 aaPredicted RBP16.45■□□□□ 0.22
PMS1-213ENST00000441310 SCNN1AP37088 669 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 DCTP40126 519 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 POLR2JP52435 117 aaKnown RBP16.45■□□□□ 0.22
PMS1-213ENST00000441310 SREBF2Q12772 1141 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 IRF5Q13568 498 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 NAPEPLDQ6IQ20 393 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 OR52K2Q8NGK3 314 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 ZNF566Q969W8 418 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 ATXN3LQ9H3M9 355 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 WDCPQ9H6R7 721 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 C12orf10Q9HB07 376 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 SHROOM3Q8TF72 1996 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 NOS1APO75052 506 aaPredicted RBP16.45■□□□□ 0.22
PMS1-213ENST00000441310 MT-CYBP00156 380 aaPredicted RBP16.45■□□□□ 0.22
PMS1-213ENST00000441310 SLC26A3P40879 764 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 DAB2P98082 770 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 COQ5Q5HYK3 327 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 ARMC4Q5T2S8 1044 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 SCN4BQ8IWT1 228 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 BRSK1Q8TDC3 778 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 UBE2FQ969M7 185 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 NT5C3BQ969T7 300 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 CEP19Q96LK0 163 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 SLC2A13Q96QE2 648 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 COLEC11Q9BWP8 271 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 UGT2B28Q9BY64 529 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 RNF6Q9Y252 685 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 OR2A25A4D2G3 310 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 OR6C70A6NIJ9 312 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 TMEM88BA6NKF7 163 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 SLC22A3O75751 556 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 PCSK1P29120 753 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 ETV3P41162 512 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 MGAT3Q09327 533 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 FADDQ13158 208 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 PCID2Q5JVF3 399 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 ZNF280BQ86YH2 543 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 SMARCD1Q96GM5 515 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 RIPOR3Q96MK2 946 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 SDHCQ99643 169 aaPredicted RBP16.45■□□□□ 0.22
PMS1-213ENST00000441310 MYOCQ99972 504 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 KCNS3Q9BQ31 491 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 ITPAQ9BY32 194 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 SYTL2Q9HCH5 934 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 ABI2Q9NYB9 513 aaPredicted RBP16.45■□□□□ 0.22
PMS1-213ENST00000441310 RAPGEFL1Q9UHV5 662 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 ADGRE2Q9UHX3 823 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 TMEFF2Q9UIK5 374 aaPredicted RBP16.45■□□□□ 0.22
PMS1-213ENST00000441310 CDH9Q9ULB4 789 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 KLHL20Q9Y2M5 609 aa16.45■□□□□ 0.22
PMS1-213ENST00000441310 ERI2A8K979 691 aaKnown RBP16.44■□□□□ 0.22
PMS1-213ENST00000441310 ENPP1P22413 925 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 AZGP1P25311 298 aaKnown RBP16.44■□□□□ 0.22
PMS1-213ENST00000441310 TAB1Q15750 504 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 PARP15Q460N3 678 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 OVOS1Q6IE37 1185 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 ADAMTSL2Q86TH1 951 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 TMEM86AQ8N2M4 240 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 SVOPLQ8N434 492 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 TRNT1Q96Q11 434 aaKnown RBP16.44■□□□□ 0.22
PMS1-213ENST00000441310 OR12D3Q9UGF7 316 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 HMX3A6NHT5 357 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 ZNF780AO75290 641 aaPredicted RBP16.44■□□□□ 0.22
PMS1-213ENST00000441310 KATNA1O75449 491 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 MOCS2O96007 188 aaPredicted RBP16.44■□□□□ 0.22
PMS1-213ENST00000441310 ODC1P11926 461 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 GRK5P34947 590 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 IRF3Q14653 427 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 LDB1Q86U70 411 aaPredicted RBP16.44■□□□□ 0.22
PMS1-213ENST00000441310 TAC4Q86UU9 113 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 TOR1AIP2Q8NFQ8 470 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 UBASH3BQ8TF42 649 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 MICAL3Q7RTP6 2002 aa16.44■□□□□ 0.22
PMS1-213ENST00000441310 A0A0U1RQF3 1178 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 A8MX80 341 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 HHLA1C9JL84 531 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 GLULP15104 373 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 CTSKP43235 329 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 ZFP36L2P47974 494 aaKnown RBP16.43■□□□□ 0.22
PMS1-213ENST00000441310 SUZ12Q15022 739 aaKnown RBP16.43■□□□□ 0.22
PMS1-213ENST00000441310 PAFAH1B3Q15102 231 aaKnown RBP16.43■□□□□ 0.22
PMS1-213ENST00000441310 PFKFB4Q16877 469 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 DPY19L3Q6ZPD9 716 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 PIM3Q86V86 326 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 METTL23Q86XA0 190 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 TRIM48Q8IWZ4 208 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 SETD9Q8NE22 299 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 GPR152Q8TDT2 470 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 SH3RF2Q8TEC5 729 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 TBCDQ9BTW9 1192 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 GRIP1Q9Y3R0 1128 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 GMPPBQ9Y5P6 360 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 TRPM7Q96QT4 1865 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 TYW5A2RUC4 315 aaKnown RBP16.43■□□□□ 0.22
PMS1-213ENST00000441310 SLC16A6O15403 523 aa16.43■□□□□ 0.22
PMS1-213ENST00000441310 GGT1P19440 569 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms