RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 IMPDH1P20839 514 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 ERVK-8P63133 956 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 TARDBPQ13148 414 aaKnown RBP eCLIP14.38□□□□□ -0.11
PCNX1-202ENST00000439984 CRY2Q49AN0 593 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 IFI44LQ53G44 452 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 EEF1DP3Q658K8 133 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 NOXA1Q86UR1 476 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 OR10H4Q8NGA5 316 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 C8orf48Q96LL4 319 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 SEZ6LQ9BYH1 1024 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 ENAMQ9NRM1 1142 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 RPL36Q9Y3U8 105 aaKnown RBP14.38□□□□□ -0.11
PCNX1-202ENST00000439984 DNMT3AQ9Y6K1 912 aaPredicted RBP14.38□□□□□ -0.11
PCNX1-202ENST00000439984 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.38□□□□□ -0.11
PCNX1-202ENST00000439984 A0A1W2PQ67 120 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 PRH1P02810 166 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 PSMA6P60900 246 aaKnown RBP14.38□□□□□ -0.11
PCNX1-202ENST00000439984 HERVK_113P63132 956 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 HSDL1Q3SXM5 330 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 SETMARQ53H47 684 aaPredicted RBP14.38□□□□□ -0.11
PCNX1-202ENST00000439984 KIAA1161Q6NSJ0 714 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 SMARCD3Q6STE5 483 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 RELL1Q8IUW5 271 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 ERVK-6Q9BXR3 956 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 ZYG11BQ9C0D3 744 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 SLC7A5P2Q9GIP4 190 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 CD93Q9NPY3 652 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 FKBP14Q9NWM8 211 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 SMPD4Q9NXE4 827 aa14.38□□□□□ -0.11
PCNX1-202ENST00000439984 GSTM2P28161 218 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 MANFP55145 182 aaKnown RBP14.37□□□□□ -0.11
PCNX1-202ENST00000439984 CDKL4Q5MAI5 379 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 ANKFN1Q8N957 763 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 C3orf58Q8NDZ4 430 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 GAL3ST3Q96A11 431 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 ATG10Q9H0Y0 220 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 DCLK1O15075 740 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 KIAA0513O60268 411 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 ERAL1O75616 437 aaKnown RBP14.37□□□□□ -0.11
PCNX1-202ENST00000439984 RECQL4O94761 1208 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 DNASE1P24855 282 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 INHBCP55103 352 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 BCL2L1Q07817 233 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 SNAPC2Q13487 334 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 NBPF12Q5TAG4 269 aaPredicted RBP14.37□□□□□ -0.11
PCNX1-202ENST00000439984 PHACTR4Q8IZ21 702 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 SIDT2Q8NBJ9 832 aaKnown RBP14.37□□□□□ -0.11
PCNX1-202ENST00000439984 ZDHHC7Q9NXF8 308 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 ERP29P30040 261 aaKnown RBP14.37□□□□□ -0.11
PCNX1-202ENST00000439984 HOXD13P35453 343 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 GNASQ5JWF2 1037 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 ANKRD54Q6NXT1 300 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 CMTR2Q8IYT2 770 aaKnown RBP14.37□□□□□ -0.11
PCNX1-202ENST00000439984 AGO3Q9H9G7 860 aaKnown RBP14.37□□□□□ -0.11
PCNX1-202ENST00000439984 SPACA6W5XKT8 324 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 REM1O75628 298 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 RP2O75695 350 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 RPP40O75818 363 aaKnown RBP14.37□□□□□ -0.11
PCNX1-202ENST00000439984 CKMT1AP12532 417 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 LPOP22079 712 aaPredicted RBP14.37□□□□□ -0.11
PCNX1-202ENST00000439984 PGGT1BP53609 377 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 OGDHQ02218 1023 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 FOXB2Q5VYV0 432 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 LRRC66Q68CR7 880 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 GALNTL5Q7Z4T8 443 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 SNX20Q7Z614 316 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 UNC93AQ86WB7 457 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 KIAA0319LQ8IZA0 1049 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 RIT1Q92963 219 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 NECTIN3Q9NQS3 549 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 NRP1O14786 923 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 CSN2P05814 226 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 ZNF14P17017 642 aaPredicted RBP14.37□□□□□ -0.11
PCNX1-202ENST00000439984 CTXN3Q4LDR2 81 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 ZNF598Q86UK7 904 aaKnown RBP14.37□□□□□ -0.11
PCNX1-202ENST00000439984 DENND6BQ8NEG7 585 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 XAGE5Q8WWM1 108 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 AKT1S1Q96B36 256 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 HAVCR1Q96D42 359 aa14.37□□□□□ -0.11
PCNX1-202ENST00000439984 RANBP3Q9H6Z4 567 aaPredicted RBP14.37□□□□□ -0.11
PCNX1-202ENST00000439984 C2CD4BA6NLJ0 364 aa14.36□□□□□ -0.11
PCNX1-202ENST00000439984 BTBD19C9JJ37 291 aa14.36□□□□□ -0.11
PCNX1-202ENST00000439984 PKMP14618 531 aaKnown RBP14.36□□□□□ -0.11
PCNX1-202ENST00000439984 AFF1P51825 1210 aaKnown RBP14.36□□□□□ -0.11
PCNX1-202ENST00000439984 KIAA1614Q5VZ46 1190 aa14.36□□□□□ -0.11
PCNX1-202ENST00000439984 SLC27A1Q6PCB7 646 aa14.36□□□□□ -0.11
PCNX1-202ENST00000439984 ZCCHC12Q6PEW1 402 aa14.36□□□□□ -0.11
PCNX1-202ENST00000439984 CPNE9Q8IYJ1 553 aa14.36□□□□□ -0.11
PCNX1-202ENST00000439984 TMEM209Q96SK2 561 aa14.36□□□□□ -0.11
PCNX1-202ENST00000439984 ANKRD60Q9BZ19 345 aa14.36□□□□□ -0.11
PCNX1-202ENST00000439984 FARSBQ9NSD9 589 aaKnown RBP14.36□□□□□ -0.11
PCNX1-202ENST00000439984 POLR1DQ9Y2S0 133 aa14.36□□□□□ -0.11
PCNX1-202ENST00000439984 TLR4O00206 839 aa14.36□□□□□ -0.11
PCNX1-202ENST00000439984 AKAP8O43823 692 aaKnown RBP14.36□□□□□ -0.11
PCNX1-202ENST00000439984 ARF4P18085 180 aaPredicted RBP14.36□□□□□ -0.11
PCNX1-202ENST00000439984 PRKCHP24723 683 aa14.36□□□□□ -0.11
PCNX1-202ENST00000439984 PCSK6P29122 969 aa14.36□□□□□ -0.11
PCNX1-202ENST00000439984 ADRA1BP35368 520 aa14.36□□□□□ -0.11
PCNX1-202ENST00000439984 BTN3A2P78410 334 aa14.36□□□□□ -0.11
PCNX1-202ENST00000439984 FAM217AQ8IXS0 508 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms