RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ZNF623O75123 536 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 CPNE3O75131 537 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 SERPINA1P01009 418 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 FGF1P05230 155 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 LPOP22079 712 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 AKT1P31749 480 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 MAGEA12P43365 314 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 ST13P50502 369 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 FKBP1BP68106 108 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 BOP1Q14137 746 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 MBTPS1Q14703 1052 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 HERC3Q15034 1050 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 SMU1Q2TAY7 513 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 SMUG1Q53HV7 270 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 CCBE1Q6UXH8 406 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 PLEKHG7Q6ZR37 379 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 USP43Q70EL4 1123 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 PELI3Q8N2H9 469 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 FBXO22Q8NEZ5 403 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 WBP2Q969T9 261 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 TMEM125Q96AQ2 219 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 OMA1Q96E52 524 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 GFM1Q96RP9 751 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 DCSTAMPQ9H295 470 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 FAM118AQ9NWS6 357 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 PAK1IP1Q9NWT1 392 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 TEKT2Q9UIF3 430 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 IKZF3Q9UKT9 509 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 EIF3LQ9Y262 564 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 LOC100130705A0A1B0GUX0 176 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 SYNDIG1LA6NDD5 238 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 SLC38A8A6NNN8 435 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 EFCAB9A8MZ26 197 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 PRMT5O14744 637 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 INSIG1O15503 277 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 JRKO75564 520 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 OPN1SWP03999 348 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 PKMP14618 531 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 SSTR4P31391 388 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 ZNF135P52742 658 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 CYP4F8P98187 520 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 IL10RBQ08334 325 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 SMARCB1Q12824 385 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 TRAP1Q12931 704 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 AASDHQ4L235 1098 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 XAF1Q6GPH4 301 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 KIAA0408Q6ZU52 694 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 TMEM179BQ7Z7N9 219 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 UMODL1-AS1Q8N2C9 162 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 CADM2Q8N3J6 435 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 CHDHQ8NE62 594 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 PPP1R14BQ96C90 147 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 KCNC2Q96PR1 638 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 TTPALQ9BTX7 342 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 BOCQ9BWV1 1114 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 CIPCQ9C0C6 399 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 MFSD1Q9H3U5 465 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 FARSBQ9NSD9 589 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 COMMD8Q9NX08 183 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 ZSCAN5BA6NJL1 495 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 SLC1A7O00341 560 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 SEC22BO75396 215 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 PRAMEF12O95522 483 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 ANXA6P08133 673 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 MMP2P08253 660 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 HLA-DPA1P20036 260 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 HRH2P25021 359 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 GP2P55259 537 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 RPL26P61254 145 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 ATP6V0D1P61421 351 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 SP3Q02447 781 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 MED22Q15528 200 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 SF1Q15637 639 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 NKG7Q16617 165 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 DPY19L1Q2PZI1 675 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 NEK5Q6P3R8 708 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 VTCN1Q7Z7D3 282 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 ARMC8Q8IUR7 673 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 MDGA1Q8NFP4 955 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 HDAC2Q92769 488 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 FAM120BQ96EK7 910 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 IKZF5Q9H5V7 419 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 NSUN3Q9H649 340 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 MEAF6Q9HAF1 191 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 TIGARQ9NQ88 270 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 VAPAQ9P0L0 249 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 TMED5Q9Y3A6 229 aa9.73□□□□□ -0.85
CDC42SE1-202ENST00000439374 VCANP13611 3396 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 APOL3O95236 402 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 ATXN1LP0C7T5 689 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 TYMPP19971 482 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 TTKP33981 857 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 RFTN1Q14699 578 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 SPANXN4Q5MJ08 99 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 STEAP3Q658P3 488 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 GPRIN3Q6ZVF9 776 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 LIMS2Q7Z4I7 341 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 HORMAD1Q86X24 394 aa9.72□□□□□ -0.85
CDC42SE1-202ENST00000439374 COLGALT2Q8IYK4 626 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms