RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 TMPRSS11FQ6ZWK6 438 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 ADCK2Q7Z695 626 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 ZNF554Q86TJ5 538 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 METTL23Q86XA0 190 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 MFN1Q8IWA4 741 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 FAM114A1Q8IWE2 563 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 OR10V1Q8NGI7 309 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 SETD6Q8TBK2 473 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 GRAPLQ8TC17 118 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 RNF128Q8TEB7 428 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 ATL1Q8WXF7 558 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 SLAMF9Q96A28 289 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 ARSGQ96EG1 525 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 MYADMQ96S97 322 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 SEPHS2Q99611 448 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 SLC25A23Q9BV35 468 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 VN1R1Q9GZP7 353 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 VPS33BQ9H267 617 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 TXLNGQ9NUQ3 528 aa3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 ZNF624Q9P2J8 865 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC13-204ENST00000438419 SOS1Q07889 1333 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 A0A0G2JLW4 131 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 SMIM1B2RUZ4 78 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 TRIM77I1YAP6 450 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 PCDH7O60245 1069 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 RNASEH1O60930 286 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 RECQL5O94762 991 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 TSHBP01222 138 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 DANCRP0C864 163 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 IFNAR1P17181 557 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 AZGP1P25311 298 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 GP5P40197 560 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 MTHFRP42898 656 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 PDX1P52945 283 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 TPD52P55327 224 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 HNRNPKP61978 463 aaKnown RBP eCLIP3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 RBPJQ06330 500 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 SCARB2Q14108 478 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 PTPRCAPQ14761 206 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 VWC2Q2TAL6 325 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 TRAT1Q6PIZ9 186 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 DCLRE1AQ6PJP8 1040 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 RBMS3Q6XE24 437 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 ERN2Q76MJ5 926 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 DGLUCYQ7Z3D6 616 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 TRPT1Q86TN4 253 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 COMMD2Q86X83 199 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 FOXP4Q8IVH2 680 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 CEP57L1Q8IYX8 460 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 CCAR2Q8N163 923 aaKnown RBP3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 TRIML1Q8N9V2 468 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 IQUBQ8NA54 791 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 OR5M8Q8NGP6 311 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 GOT1L1Q8NHS2 421 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 CCDC107Q8WV48 283 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 SFXN2Q96NB2 322 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 PGLYRP2Q96PD5 576 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 PSD2Q9BQI7 771 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 RTP3Q9BQQ7 232 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 RHNO1Q9BSD3 238 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 ADPRHL2Q9NX46 363 aa3.38□□□□□ -1.87
TRAPPC13-204ENST00000438419 TRAV34A0A0B4J273 112 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 A0A1W2PN81 502 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 TMEM221A6NGB7 291 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 DUXAA6NLW8 204 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 PMS2P5A8MQ11 134 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 ERVV-2B6SEH9 535 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 E9PI62 339 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 BLOC1S5-TXNDC5H3BN57 136 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 GAPDHSO14556 408 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 CIDEAO60543 219 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 HSP90AB1P08238 724 aaKnown RBP3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 CHRNA7P36544 502 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 PRKCIP41743 596 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 LINC01547P58512 204 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 RBP5P82980 135 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 ACSM1Q08AH1 577 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 TAF13Q15543 124 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 CORO6Q6QEF8 472 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 PET117Q6UWS5 81 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 DET1Q7L5Y6 550 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 ISCA2Q86U28 154 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 OR8H3Q8N146 312 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 OR1J1Q8NGS3 322 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 DEPDC1BQ8WUY9 529 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 ZNF524Q96C55 264 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 NSL1Q96IY1 281 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 JAKMIP1Q96N16 626 aaKnown RBP3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 SPAG5Q96R06 1193 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 TRAF4Q9BUZ4 470 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 ALDH8A1Q9H2A2 487 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 ARRDC1-AS1Q9H2J1 176 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 CHCHD3Q9NX63 227 aaKnown RBP3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 RNF150Q9ULK6 438 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 PADI2Q9Y2J8 665 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 LIPGQ9Y5X9 500 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 POMT1Q9Y6A1 747 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 WDR81Q562E7 1941 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 FLT1P17948 1338 aa3.37□□□□□ -1.87
TRAPPC13-204ENST00000438419 FEZF1A0PJY2 475 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms