RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.69□□□□□ -1.828e-7■■■□□ 18.9
SHPRH-205ENST00000433355 FADS2P1A8MWK0 482 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 LRRTM2O43300 516 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 SLC35G4P0C7Q5 338 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 CKMT1AP12532 417 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 COX7A2P14406 83 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 IRF8Q02556 426 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 AGKQ53H12 422 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 FBXW10Q5XX13 1052 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 ZNF598Q86UK7 904 aaKnown RBP3.69□□□□□ -1.82
SHPRH-205ENST00000433355 KIAA2013Q8IYS2 634 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 RGL4Q8IZJ4 473 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 MS4A15Q8N5U1 240 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 PJA1Q8NG27 643 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 OR5K1Q8NHB7 308 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 TMEM190Q8WZ59 177 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 VPS35Q96QK1 796 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 YME1L1Q96TA2 773 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 UCK2Q9BZX2 261 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 GPN2Q9H9Y4 310 aaPredicted RBP3.69□□□□□ -1.82
SHPRH-205ENST00000433355 TMEM14AQ9Y6G1 99 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 CKAP5Q14008 2032 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 TSPAN11A1L157 253 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 A8MT66 165 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 MAGEB17A8MXT2 336 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 UPK3BL1B0FP48 263 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 UPK3BL2E5RIL1 263 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 RNASET2O00584 256 aaKnown RBP3.69□□□□□ -1.82
SHPRH-205ENST00000433355 ELFN1P0C7U0 828 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 IBSPP21815 317 aaPredicted RBP3.69□□□□□ -1.82
SHPRH-205ENST00000433355 ITGB7P26010 798 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 PTGS2P35354 604 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 FAUP35544 74 aaKnown RBP3.69□□□□□ -1.82
SHPRH-205ENST00000433355 GMPRP36959 345 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 GAD2Q05329 585 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 ORC1Q13415 861 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 NFATC2Q13469 925 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 RAB30Q15771 203 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 KCNJ8Q15842 424 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 IL31Q6EBC2 164 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 DHRS4L2Q6PKH6 230 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 TMEM64Q6YI46 380 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 TMEM26Q6ZUK4 368 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 GALNT12Q8IXK2 581 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 SLC15A3Q8IY34 581 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 GLIS3Q8NEA6 775 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 FNDC8Q8TC99 324 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 MZB1Q8WU39 189 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 IGSF21Q96ID5 467 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 PSD2Q9BQI7 771 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 PLCXD1Q9NUJ7 323 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 IFT52Q9Y366 437 aa3.69□□□□□ -1.82
SHPRH-205ENST00000433355 ARVCFO00192 962 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 PHGDHO43175 533 aaKnown RBP3.68□□□□□ -1.82
SHPRH-205ENST00000433355 MBL2P11226 248 aaPredicted RBP3.68□□□□□ -1.82
SHPRH-205ENST00000433355 DPTQ07507 201 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 DSC3Q14574 896 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 TIGD2Q4W5G0 525 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 XKR7Q5GH72 579 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 ZNF311Q5JNZ3 666 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 PYHIN1Q6K0P9 492 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 LRRC56Q8IYG6 542 aaPredicted RBP3.68□□□□□ -1.82
SHPRH-205ENST00000433355 MICU2Q8IYU8 434 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 OR52K1Q8NGK4 314 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 OR2W6PQ8NHA6 318 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 CEP19Q96LK0 163 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 CDRT15Q96T59 188 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 NDNQ99608 321 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 FGFBP2Q9BYJ0 223 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 POMKQ9H5K3 350 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 FANCEQ9HB96 536 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 FADS3Q9Y5Q0 445 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 CDH10Q9Y6N8 788 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 USP9YO00507 2555 aaPredicted RBP3.68□□□□□ -1.82
SHPRH-205ENST00000433355 FAM86C2PA6NEL3 165 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 KCNK1O00180 336 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 AIM2O14862 343 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 CNTN5O94779 1100 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 ZBTB11O95625 1053 aaPredicted RBP3.68□□□□□ -1.82
SHPRH-205ENST00000433355 ERCC1P07992 297 aaPredicted RBP3.68□□□□□ -1.82
SHPRH-205ENST00000433355 CDK4P11802 303 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 IL1R2P27930 398 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 PFKFB4Q16877 469 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 ZNF829Q3KNS6 432 aaPredicted RBP3.68□□□□□ -1.82
SHPRH-205ENST00000433355 MZT2BQ6NZ67 158 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 DPPA4Q7L190 304 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 P2RY8Q86VZ1 359 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 TMEM79Q9BSE2 394 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 AARSD1Q9BTE6 412 aaKnown RBP3.68□□□□□ -1.82
SHPRH-205ENST00000433355 THSD1Q9NS62 852 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 ZFP57Q9NU63 452 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 KLQ9UEF7 1012 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 UGT2A1Q9Y4X1 527 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 NUP210Q8TEM1 1887 aaPredicted RBP3.68□□□□□ -1.82
SHPRH-205ENST00000433355 ZNF106Q9H2Y7 1883 aaKnown RBP3.68□□□□□ -1.82
SHPRH-205ENST00000433355 H0YIV9 168 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 TP73O15350 636 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 KCNK5O95279 499 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 SDC2P34741 201 aa3.68□□□□□ -1.82
SHPRH-205ENST00000433355 RGS1Q08116 209 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms