RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 SLC19A1P41440 591 aa25.72■■□□□ 1.71
TMEM248-205ENST00000433271 NAA20P61599 178 aa25.72■■□□□ 1.71
TMEM248-205ENST00000433271 SHBQ15464 509 aa25.72■■□□□ 1.71
TMEM248-205ENST00000433271 HLA-BQ31612 363 aa25.72■■□□□ 1.71
TMEM248-205ENST00000433271 C18orf21Q32NC0 220 aaPredicted RBP25.72■■□□□ 1.71
TMEM248-205ENST00000433271 UNC50Q53HI1 259 aa25.72■■□□□ 1.71
TMEM248-205ENST00000433271 FBXO48Q5FWF7 155 aa25.72■■□□□ 1.71
TMEM248-205ENST00000433271 NAGSQ8N159 534 aa25.72■■□□□ 1.71
TMEM248-205ENST00000433271 ZDHHC1Q8WTX9 485 aa25.72■■□□□ 1.71
TMEM248-205ENST00000433271 CXorf40BQ96DE9 158 aa25.72■■□□□ 1.71
TMEM248-205ENST00000433271 CAMK1GQ96NX5 476 aa25.72■■□□□ 1.71
TMEM248-205ENST00000433271 TMEM79Q9BSE2 394 aa25.72■■□□□ 1.71
TMEM248-205ENST00000433271 HGH1Q9BTY7 390 aa25.72■■□□□ 1.71
TMEM248-205ENST00000433271 CD244Q9BZW8 370 aa25.72■■□□□ 1.71
TMEM248-205ENST00000433271 CIDEBQ9UHD4 219 aa25.72■■□□□ 1.71
TMEM248-205ENST00000433271 VPS13AQ96RL7 3174 aa25.72■■□□□ 1.71
TMEM248-205ENST00000433271 USP34Q70CQ2 3546 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 PATE3B3GLJ2 98 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 TMEM114B3SHH9 223 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 TCP11X1B4DZS4 312 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 SDC3O75056 442 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 SUPT7LO94864 414 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 ANXA6P08133 673 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 RPS17P08708 135 aaKnown RBP25.71■■□□□ 1.71
TMEM248-205ENST00000433271 MPLP40238 635 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 ZXDCQ2QGD7 858 aaPredicted RBP25.71■■□□□ 1.71
TMEM248-205ENST00000433271 ANKS6Q68DC2 871 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 AGTRAPQ6RW13 159 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 SFRP1Q8N474 314 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 ESAMQ96AP7 390 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 MOCOSQ96EN8 888 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 CNDP1Q96KN2 507 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 DRC3Q9H069 523 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 ACSS2Q9NR19 701 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 UCKL1Q9NWZ5 548 aa25.71■■□□□ 1.71
TMEM248-205ENST00000433271 TRBV23OR9-2A0A075B6M9 112 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 A0A1B0GTQ1 180 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 LRRC14BA6NHZ5 514 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 NPHS1O60500 1241 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 IMPA1P29218 277 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 SERPINB5P36952 375 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 HSD17B2P37059 387 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 HSPA7P48741 367 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 ARHGAP19Q14CB8 494 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 PPP4R1Q8TF05 950 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 ZNF480Q8WV37 535 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 ZFPM2Q8WW38 1151 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 ARRDC1-AS1Q9H2J1 176 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 FSCN3Q9NQT6 498 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 THAP1Q9NVV9 213 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 LNPEPQ9UIQ6 1025 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 ASB1Q9Y576 335 aa25.7■■□□□ 1.71
TMEM248-205ENST00000433271 SHOX2O60902 331 aaPredicted RBP25.7■■□□□ 1.7
TMEM248-205ENST00000433271 SNNO75324 88 aaPredicted RBP25.7■■□□□ 1.7
TMEM248-205ENST00000433271 STK16O75716 305 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 SLC1A6P48664 564 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 BNIP3Q12983 259 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 RCN2Q14257 317 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 LAIR1Q6GTX8 287 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 FRMD7Q6ZUT3 714 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 SLC25A45Q8N413 288 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 PATE1Q8WXA2 126 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 ZNF317Q96PQ6 595 aaPredicted RBP25.7■■□□□ 1.7
TMEM248-205ENST00000433271 TRMOQ9BU70 441 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 MENTQ9BUN1 341 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 GSTO2Q9H4Y5 243 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 KIR3DX1Q9H7L2 352 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 SLC40A1Q9NP59 571 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 POT1Q9NUX5 634 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 CPNE7Q9UBL6 633 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 PCTPQ9UKL6 214 aa25.7■■□□□ 1.7
TMEM248-205ENST00000433271 E2F3O00716 465 aa25.69■■□□□ 1.7
TMEM248-205ENST00000433271 ARHGAP33O14559 1287 aa25.69■■□□□ 1.7
TMEM248-205ENST00000433271 YKT6O15498 198 aa25.69■■□□□ 1.7
TMEM248-205ENST00000433271 KDM1AO60341 852 aa25.69■■□□□ 1.7
TMEM248-205ENST00000433271 SYPP08247 313 aa25.69■■□□□ 1.7
TMEM248-205ENST00000433271 ERGP11308 486 aa25.69■■□□□ 1.7
TMEM248-205ENST00000433271 SLC6A12P48065 614 aa25.69■■□□□ 1.7
TMEM248-205ENST00000433271 ABCE1P61221 599 aaKnown RBP25.69■■□□□ 1.7
TMEM248-205ENST00000433271 PTCHD3Q3KNS1 767 aa25.69■■□□□ 1.7
TMEM248-205ENST00000433271 TRIM48Q8IWZ4 208 aa25.69■■□□□ 1.7
TMEM248-205ENST00000433271 RAB42Q8N4Z0 105 aa25.69■■□□□ 1.7
TMEM248-205ENST00000433271 SLC37A2Q8TED4 501 aa25.69■■□□□ 1.7
TMEM248-205ENST00000433271 ZNF483Q8TF39 744 aaPredicted RBP25.69■■□□□ 1.7
TMEM248-205ENST00000433271 ATG10Q9H0Y0 220 aa25.69■■□□□ 1.7
TMEM248-205ENST00000433271 SPATA7Q9P0W8 599 aa25.69■■□□□ 1.7
TMEM248-205ENST00000433271 PLAGL1Q9UM63 463 aa25.69■■□□□ 1.7
TMEM248-205ENST00000433271 LAMA1P25391 3075 aa25.68■■□□□ 1.7
TMEM248-205ENST00000433271 PRAMEF33A0A0G2JMD5 474 aa25.68■■□□□ 1.7
TMEM248-205ENST00000433271 ARRB2P32121 409 aa25.68■■□□□ 1.7
TMEM248-205ENST00000433271 GDF5P43026 501 aa25.68■■□□□ 1.7
TMEM248-205ENST00000433271 PNLIPRP1P54315 467 aa25.68■■□□□ 1.7
TMEM248-205ENST00000433271 UBE2IP63279 158 aaKnown RBP25.68■■□□□ 1.7
TMEM248-205ENST00000433271 TCF15Q12870 199 aa25.68■■□□□ 1.7
TMEM248-205ENST00000433271 DEFB133Q30KQ1 61 aa25.68■■□□□ 1.7
TMEM248-205ENST00000433271 LRRC70Q7Z2Q7 622 aa25.68■■□□□ 1.7
TMEM248-205ENST00000433271 SYTL1Q8IYJ3 562 aa25.68■■□□□ 1.7
TMEM248-205ENST00000433271 OR56A3Q8NH54 315 aa25.68■■□□□ 1.7
TMEM248-205ENST00000433271 NUSAP1Q9BXS6 441 aaKnown RBP25.68■■□□□ 1.7
TMEM248-205ENST00000433271 C20orf27Q9GZN8 174 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms