RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 CLPPQ16740 277 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 CCSMST1Q4G0I0 132 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 DNAJC21Q5F1R6 531 aaKnown RBP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 ACSBG2Q5FVE4 666 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 SPANXN3Q5MJ09 141 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 DNTTIP2Q5QJE6 756 aaKnown RBP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 DCAF12Q5T6F0 453 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZNF549Q6P9A3 640 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 TTC23LQ6PF05 361 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 KLHL35Q6PF15 583 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 PDZD3Q86UT5 571 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 AMIGO1Q86WK6 493 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 CCDC25Q86WR0 208 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 OOSP2Q86WS3 158 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 LRRC6Q86X45 466 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 RASGRP3Q8IV61 690 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 FAM20CQ8IXL6 584 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 TBC1D21Q8IYX1 336 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLC22A15Q8IZD6 547 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZBTB2Q8N680 514 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 SIDT2Q8NBJ9 832 aaKnown RBP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZNF248Q8NDW4 579 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 ACVR1CQ8NER5 493 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 PYROXD1Q8WU10 500 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 ZFPM2Q8WW38 1151 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 KCNE4Q8WWG9 221 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 CERS2Q96G23 380 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 IL17FQ96PD4 163 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 OR6C1Q96RD1 312 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 TAAR9Q96RI9 348 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 TCF12Q99081 682 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 NDNQ99608 321 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLC30A3Q99726 388 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 SAP130Q9H0E3 1048 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 CCDC68Q9H2F9 335 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 EPB41L1Q9H4G0 881 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 KIR3DX1Q9H7L2 352 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 MVB12BQ9H7P6 319 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 SAYSD1Q9NPB0 183 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 ASCL3Q9NQ33 180 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 ABCF3Q9NUQ8 709 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 PDP2Q9P2J9 529 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLC17A6Q9P2U8 582 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 POLG2Q9UHN1 485 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 RALYQ9UKM9 306 aaKnown RBP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 FBXO5Q9UKT4 447 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 CDYLQ9Y232 598 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 UTP11Q9Y3A2 253 aaKnown RBP5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 PCDHGA8Q9Y5G5 932 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 HEBP2Q9Y5Z4 205 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 NFS1Q9Y697 457 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 TEX264Q9Y6I9 313 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 CFAP54Q96N23 3096 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 PCM1Q15154 2024 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 WDR87Q6ZQQ6 2873 aa5.6□□□□□ -1.51
HMGB3P24-201ENST00000433260 TEX51A0A1B0GUA7 166 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 PIPSLA2A3N6 862 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 HGSO14964 777 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 SLCO2B1O94956 709 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 SYF2O95926 243 aaKnown RBP5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 ESR1P03372 595 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 ITGA2BP08514 1039 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 EBLN1P0CF75 366 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 PVRP15151 417 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 FOLR1P15328 257 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 MCM3P25205 808 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 GABRB3P28472 473 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 BDKRB1P46663 353 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 KPNA2P52292 529 aaKnown RBP5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 ERVPABLB-1P60509 514 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 CXADRP78310 365 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 MC2RQ01718 297 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 PLOD1Q02809 727 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 GUCY2DQ02846 1103 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 SRSF6Q13247 344 aaKnown RBP5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 GRB7Q14451 532 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 GPR19Q15760 415 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 WHAMMP3Q1A5X7 153 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 TYSND1Q2T9J0 566 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 COL28A1Q2UY09 1125 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 KLHL38Q2WGJ6 581 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 PLEKHS1Q5SXH7 462 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 RBM20Q5T481 1227 aaKnown RBP5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 TEDDM1Q5T9Z0 273 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 RNF187Q5TA31 235 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 DUPD1Q68J44 220 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 C8orf74Q6P047 294 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 TRMT10BQ6PF06 316 aaKnown RBP5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 TAX1BP1Q86VP1 789 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 LMNTD2Q8IXW0 634 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 ADGRF3Q8IZF5 1079 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 GPATCH11Q8N954 259 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 NOA1Q8NC60 698 aaKnown RBP5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 KIF18AQ8NI77 898 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 CALML6Q8TD86 181 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 IFT81Q8WYA0 676 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 INPP5DQ92835 1189 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 GPR21Q99679 349 aa5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 WDR83Q9BRX9 315 aaKnown RBP5.59□□□□□ -1.51
HMGB3P24-201ENST00000433260 FAM167BQ9BTA0 163 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms