RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 WDR37Q9Y2I8 494 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 OR2A25A4D2G3 310 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 HEPACAM2A8MVW5 462 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 DFFBO76075 338 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 NXPH2O95156 264 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 MOCS3O95396 460 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 MATR3P43243 847 aaKnown RBP eCLIP2.92□□□□□ -1.94
CLK1-204ENST00000432425 CTU2Q2VPK5 515 aaKnown RBP2.92□□□□□ -1.94
CLK1-204ENST00000432425 DUSP28Q4G0W2 176 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 ELFN2Q5R3F8 820 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 C1orf122Q6ZSJ8 110 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 TMPRSS11FQ6ZWK6 438 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 CDK20Q8IZL9 346 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 OR5AP2Q8NGF4 316 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 FNBP1Q96RU3 617 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 SERINC2Q96SA4 455 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 PAFAH2Q99487 392 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 GRID1Q9ULK0 1009 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 NME7Q9Y5B8 376 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 RPGRIP1LQ68CZ1 1315 aa2.92□□□□□ -1.94
CLK1-204ENST00000432425 A0A1W2PQ09 198 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 KHDRBS3O75525 346 aaKnown RBP2.91□□□□□ -1.94
CLK1-204ENST00000432425 CAPN3P20807 821 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 GCH1P30793 250 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 NRIP1P48552 1158 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 SLC9A3P48764 834 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 GEMIN4P57678 1058 aaKnown RBP2.91□□□□□ -1.94
CLK1-204ENST00000432425 GSDMDP57764 484 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 CREB5Q02930 508 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 TOMM20Q15388 145 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 LCE3CQ5T5A8 94 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 WLSQ5T9L3 541 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 C20orf194Q5TEA3 1177 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 KRT79Q5XKE5 535 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 DOK6Q6PKX4 331 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 FIP1L1Q6UN15 594 aaKnown RBP2.91□□□□□ -1.94
CLK1-204ENST00000432425 SZRD1Q7Z422 152 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 HOGA1Q86XE5 327 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 CEP57Q86XR8 500 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 LACC1Q8IV20 430 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 RPAP2Q8IXW5 612 aaPredicted RBP2.91□□□□□ -1.94
CLK1-204ENST00000432425 TTC30BQ8N4P2 665 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 PHLDA1Q8WV24 401 aaPredicted RBP2.91□□□□□ -1.94
CLK1-204ENST00000432425 ARHGAP45Q92619 1136 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 SKA1Q96BD8 255 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 CDRT15Q96T59 188 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 URM1Q9BTM9 101 aaKnown RBP2.91□□□□□ -1.94
CLK1-204ENST00000432425 DGCR6LQ9BY27 220 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 MMP27Q9H306 513 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 SPHK1Q9NYA1 384 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 TAB2Q9NYJ8 693 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 CLIC5Q9NZA1 410 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 EPHA6Q9UF33 1036 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 LRWD1Q9UFC0 647 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 ASIC3Q9UHC3 531 aa2.91□□□□□ -1.94
CLK1-204ENST00000432425 MYH14Q7Z406 1995 aaKnown RBP2.9□□□□□ -1.94
CLK1-204ENST00000432425 ZNF541Q9H0D2 1346 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 LOC100509620A0A075B734 347 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 A6NCN8 305 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 ANKUB1A6NFN9 424 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 KRTAP9-6A8MVA2 160 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.9□□□□□ -1.95
CLK1-204ENST00000432425 DOK2O60496 412 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 DUS4LO95620 317 aaKnown RBP2.9□□□□□ -1.95
CLK1-204ENST00000432425 WDPCPO95876 746 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 SLC8A3P57103 927 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 DSCR10P59022 87 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 B3GALT5-AS1P59052 145 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 POU5F1Q01860 360 aaKnown RBP2.9□□□□□ -1.95
CLK1-204ENST00000432425 E2F5Q15329 346 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 HLA-BQ31612 363 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 ITPRIPL2Q3MIP1 535 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 FASTKD1Q53R41 847 aaKnown RBP2.9□□□□□ -1.95
CLK1-204ENST00000432425 IGSF11Q5DX21 431 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 LRRTM1Q86UE6 522 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 KBTBD6Q86V97 674 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 P2RY8Q86VZ1 359 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 TMEM173Q86WV6 379 aaPredicted RBP2.9□□□□□ -1.95
CLK1-204ENST00000432425 TMEM139Q8IV31 216 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 CEP57L1Q8IYX8 460 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 KIRREL3Q8IZU9 778 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 ARHGAP24Q8N264 748 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 POC5Q8NA72 575 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 ERP27Q96DN0 273 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 TREX2Q9BQ50 279 aaPredicted RBP2.9□□□□□ -1.95
CLK1-204ENST00000432425 MIS12Q9H081 205 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 TBC1D17Q9HA65 648 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 ZNF701Q9NV72 531 aaPredicted RBP2.9□□□□□ -1.95
CLK1-204ENST00000432425 HAUS2Q9NVX0 235 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 WSB2Q9NYS7 404 aaPredicted RBP2.9□□□□□ -1.95
CLK1-204ENST00000432425 ERAP1Q9NZ08 941 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 STK26Q9P289 416 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 B3GAT1Q9P2W7 334 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 TUBE1Q9UJT0 475 aa2.9□□□□□ -1.95
CLK1-204ENST00000432425 SERINC4A6NH21 518 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 MSGN1A6NI15 193 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 AGAP14A8MT82 685 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 ZNF195O14628 629 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 TSPAN9O75954 239 aa2.89□□□□□ -1.95
CLK1-204ENST00000432425 OR2T7P0C7T2 308 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms