RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 HEATR4Q86WZ0 1026 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 PROKR1Q8TCW9 393 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 RAB7BQ96AH8 199 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 SPDL1Q96EA4 605 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 MED8Q96G25 268 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 ZCCHC2Q9C0B9 1178 aaKnown RBP16.24■□□□□ 0.19
USHBP1-203ENST00000431146 MKRN2Q9H000 416 aaKnown RBP16.24■□□□□ 0.19
USHBP1-203ENST00000431146 S100A14Q9HCY8 104 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 INTS7Q9NVH2 962 aaKnown RBP16.24■□□□□ 0.19
USHBP1-203ENST00000431146 NDUFAF1Q9Y375 327 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 ASPDHA6ND91 283 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 RNASEH1O60930 286 aaKnown RBP16.24■□□□□ 0.19
USHBP1-203ENST00000431146 PDYNP01213 254 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 FLOT2Q14254 428 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 NFE2L1Q14494 772 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 BCL7AQ4VC05 210 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 COL13A1Q5TAT6 717 aaPredicted RBP16.24■□□□□ 0.19
USHBP1-203ENST00000431146 LRRC74BQ6ZQY2 392 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.24■□□□□ 0.19
USHBP1-203ENST00000431146 RGL4Q8IZJ4 473 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 FBXL8Q96CD0 374 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 HIC2Q96JB3 615 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 MSLNLQ96KJ4 702 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 PCDHAC1Q9H158 963 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 DNAJC11Q9NVH1 559 aa16.24■□□□□ 0.19
USHBP1-203ENST00000431146 RGS14O43566 566 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 POP7O75817 140 aaKnown RBP16.23■□□□□ 0.19
USHBP1-203ENST00000431146 RSL1D1O76021 490 aaKnown RBP16.23■□□□□ 0.19
USHBP1-203ENST00000431146 SLC16A8O95907 504 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 CASP2P42575 452 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 SLC7A2P52569 658 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 KCNK10P57789 538 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 EMX2Q04743 252 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 NAE1Q13564 534 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 GTF2H3Q13889 308 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 RCAN2Q14206 197 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 IMPG1Q17R60 797 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 WSCD2Q2TBF2 565 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 TIGD2Q4W5G0 525 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 PDCD4Q53EL6 469 aaKnown RBP16.23■□□□□ 0.19
USHBP1-203ENST00000431146 AP1ARQ63HQ0 302 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 PNCKQ6P2M8 343 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 CYP20A1Q6UW02 462 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 RNF111Q6ZNA4 994 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 MTSS1LQ765P7 747 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 TRMT11Q7Z4G4 463 aaKnown RBP16.23■□□□□ 0.19
USHBP1-203ENST00000431146 RNF175Q8N4F7 328 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 PCYOX1LQ8NBM8 494 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 GANCQ8TET4 914 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 PKP4Q99569 1192 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 ACTL8Q9H568 366 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 EPHX3Q9H6B9 360 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 SPAG4Q9NPE6 437 aa16.23■□□□□ 0.19
USHBP1-203ENST00000431146 MBNL1Q9NR56 388 aaKnown RBP16.23■□□□□ 0.19
USHBP1-203ENST00000431146 STOX2Q9P2F5 926 aaPredicted RBP16.23■□□□□ 0.19
USHBP1-203ENST00000431146 PRORSD1PA6NEY8 169 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 BBIP1A8MTZ0 92 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 H3BQ06 376 aaPredicted RBP16.22■□□□□ 0.19
USHBP1-203ENST00000431146 FKBP6O75344 327 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 EGFP01133 1207 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 CATP04040 527 aaKnown RBP16.22■□□□□ 0.19
USHBP1-203ENST00000431146 HALP42357 657 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 POLR2JP52435 117 aaKnown RBP16.22■□□□□ 0.19
USHBP1-203ENST00000431146 PON2Q15165 354 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 TMEM196Q5HYL7 178 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 PAGE3Q5JUK9 113 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 C8orf82Q6P1X6 216 aaPredicted RBP16.22■□□□□ 0.19
USHBP1-203ENST00000431146 AGTRAPQ6RW13 159 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 FAM83HQ6ZRV2 1179 aaPredicted RBP16.22■□□□□ 0.19
USHBP1-203ENST00000431146 BHLHE22Q8NFJ8 381 aaPredicted RBP16.22■□□□□ 0.19
USHBP1-203ENST00000431146 SPDYE1Q8NFV5 336 aaPredicted RBP16.22■□□□□ 0.19
USHBP1-203ENST00000431146 USP7Q93009 1102 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 ACPTQ9BZG2 426 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 HEBP1Q9NRV9 189 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 OR1A2Q9Y585 309 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 TRIM38O00635 465 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 NPC1O15118 1278 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 MAP3K7O43318 606 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 SEC22BO75396 215 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 C5AR1P21730 350 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 IMPA1P29218 277 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 CTHP32929 405 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 TNFRSF4P43489 277 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 RPS14P62263 151 aaKnown RBP16.22■□□□□ 0.19
USHBP1-203ENST00000431146 CHIT1Q13231 466 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 PTGR1Q14914 329 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 KBTBD6Q86V97 674 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 THOC6Q86W42 341 aaKnown RBP16.22■□□□□ 0.19
USHBP1-203ENST00000431146 SMRP1Q8NCR6 262 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 SELENOMQ8WWX9 145 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 JADE3Q92613 823 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 FOPNLQ96NB1 174 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 OSBPL6Q9BZF3 934 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 TM7SF3Q9NS93 570 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 SLAMF8Q9P0V8 285 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 ANGPTL2Q9UKU9 493 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 ZFR2Q9UPR6 939 aaKnown RBP16.22■□□□□ 0.19
USHBP1-203ENST00000431146 MTCH2Q9Y6C9 303 aa16.22■□□□□ 0.19
USHBP1-203ENST00000431146 KCNE1BA0A087WTH5 132 aa16.21■□□□□ 0.19
USHBP1-203ENST00000431146 A0A1W2PP18 115 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms