RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 KIAA1522Q9P206 1035 aaPredicted RBP8.17□□□□□ -1.1
CD44-208ENST00000428726 OGDHLQ9ULD0 1010 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 CDC14AQ9UNH5 594 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 MRPS23Q9Y3D9 190 aaKnown RBP8.17□□□□□ -1.1
CD44-208ENST00000428726 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.17□□□□□ -1.1
CD44-208ENST00000428726 SYCE1LA8MT33 242 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 FADS2P1A8MWK0 482 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 PRRT4C9JH25 899 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 PTGES3LE9PB15 166 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 hCG_2039718K7EN88 272 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 IFRD1O00458 451 aaPredicted RBP8.17□□□□□ -1.1
CD44-208ENST00000428726 GNGT2O14610 69 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 RPS17P08708 135 aaKnown RBP8.17□□□□□ -1.1
CD44-208ENST00000428726 FUT4P22083 530 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 ACRV1P26436 265 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 ELK4P28324 431 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 SPAM1P38567 509 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 CCR3P51677 355 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 LBX1P52954 281 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 PHC1P78364 1004 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 DYNC1I2Q13409 638 aaKnown RBP8.17□□□□□ -1.1
CD44-208ENST00000428726 DUS1LQ6P1R4 473 aaKnown RBP8.17□□□□□ -1.1
CD44-208ENST00000428726 BLOC1S3Q6QNY0 202 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 XKR5Q6UX68 686 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 HACD2Q6Y1H2 254 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 ZNF621Q6ZSS3 439 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 TMC8Q8IU68 726 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 EPHX4Q8IUS5 362 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 STK40Q8N2I9 435 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 NXPE1Q8N323 547 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 ELMOD1Q8N336 334 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 DCAF4L2Q8NA75 395 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 ADCY4Q8NFM4 1077 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 TSPAN14Q8NG11 270 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 OR5AK3PQ8NH89 298 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 OR52E6Q96RD3 313 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 PHOX2BQ99453 314 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 BARD1Q99728 777 aaKnown RBP8.17□□□□□ -1.1
CD44-208ENST00000428726 CFHR5Q9BXR6 569 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 NAA50Q9GZZ1 169 aaKnown RBP8.17□□□□□ -1.1
CD44-208ENST00000428726 OR2AG1Q9H205 316 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 ADNPQ9H2P0 1102 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 WDR70Q9NW82 654 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 COMMD3-BMI1R4GMX3 469 aa8.17□□□□□ -1.1
CD44-208ENST00000428726 BBIP1A8MTZ0 92 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 BOLA2-SMG1P6H3BVE0 249 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 RTCAO00442 366 aaKnown RBP8.16□□□□□ -1.1
CD44-208ENST00000428726 RAD51BO15315 384 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 ESR1P03372 595 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 CA3P07451 260 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 UROSP10746 265 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 CDK4P11802 303 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 ZNF26P17031 533 aaPredicted RBP8.16□□□□□ -1.1
CD44-208ENST00000428726 RNF144AP50876 292 aaPredicted RBP8.16□□□□□ -1.1
CD44-208ENST00000428726 MC1RQ01726 317 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 RHDQ02161 417 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 CNTN1Q12860 1018 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 TRAP1Q12931 704 aaKnown RBP8.16□□□□□ -1.1
CD44-208ENST00000428726 TRAF3Q13114 568 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 SAMD4BQ5PRF9 694 aaKnown RBP8.16□□□□□ -1.1
CD44-208ENST00000428726 B3GNT6Q6ZMB0 384 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 LPCAT2Q7L5N7 544 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 TRMT11Q7Z4G4 463 aaKnown RBP8.16□□□□□ -1.1
CD44-208ENST00000428726 SNX20Q7Z614 316 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 FAM124AQ86V42 546 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 SYTL1Q8IYJ3 562 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 RBFAQ8N0V3 343 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 DTWD1Q8N5C7 304 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 OR4K1Q8NGD4 311 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 ZFAND2BQ8WV99 257 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 KCNJ9Q92806 393 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 BIRC7Q96CA5 298 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 MAGED4Q96JG8 741 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 MYRFLQ96LU7 910 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 DPY30Q9C005 99 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 Q9H521 79 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 ELOVL6Q9H5J4 265 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 PARVBQ9HBI1 364 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 SMOXQ9NWM0 555 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 DUS2Q9NX74 493 aaKnown RBP8.16□□□□□ -1.1
CD44-208ENST00000428726 TMEM181Q9P2C4 612 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 FAF1Q9UNN5 650 aaPredicted RBP8.16□□□□□ -1.1
CD44-208ENST00000428726 SH2B3Q9UQQ2 575 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 KLHL20Q9Y2M5 609 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 SCN3AQ9NY46 2000 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 CKAP5Q14008 2032 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 PRSS51A0A1B0GVH4 220 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 FZD6O60353 706 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 STK16O75716 305 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 EFEMP2O95967 443 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 TGFB1P01137 390 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 NUDT7P0C024 238 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 ALPPL2P10696 532 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 PIM1P11309 404 aaPredicted RBP8.16□□□□□ -1.1
CD44-208ENST00000428726 ACPPP15309 386 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 EPB42P16452 691 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 CD9P21926 228 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 FSHRP23945 695 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 RGS4P49798 205 aa8.16□□□□□ -1.1
CD44-208ENST00000428726 ENTPD1P49961 510 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms