RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.12□□□□□ -0.15
SGCE-204ENST00000428696 ALKBH8Q96BT7 664 aaKnown RBP14.12□□□□□ -0.15
SGCE-204ENST00000428696 HIST1H2AHQ96KK5 128 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 PKP4Q99569 1192 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 CMKLR1Q99788 373 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 HIST1H2AJQ99878 128 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 H2AFJQ9BTM1 129 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 TRIM54Q9BYV2 358 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 RRAGDQ9NQL2 400 aaPredicted RBP14.12□□□□□ -0.15
SGCE-204ENST00000428696 ADAMTS6Q9UKP5 1117 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 SATB2Q9UPW6 733 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 NEUROG3Q9Y4Z2 214 aa14.12□□□□□ -0.15
SGCE-204ENST00000428696 PSIP1O75475 530 aaKnown RBP14.11□□□□□ -0.15
SGCE-204ENST00000428696 GUCA1CO95843 209 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 C8GP07360 202 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 CHRM5P08912 532 aaPredicted RBP14.11□□□□□ -0.15
SGCE-204ENST00000428696 TPBGLP0DKB5 382 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 CYP2A7P20853 494 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 CD9P21926 228 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 CDH3P22223 829 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 CRABP2P29373 138 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 TYK2P29597 1187 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 RAB28P51157 221 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 MAPK10P53779 464 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 RAB10P61026 200 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 ZFP36L1Q07352 338 aaKnown RBP14.11□□□□□ -0.15
SGCE-204ENST00000428696 SF1Q15637 639 aaKnown RBP14.11□□□□□ -0.15
SGCE-204ENST00000428696 CLPPQ16740 277 aaPredicted RBP14.11□□□□□ -0.15
SGCE-204ENST00000428696 LGSNQ5TDP6 509 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 WDR93Q6P2C0 686 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 TRIM73Q86UV7 250 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 SLITRK4Q8IW52 837 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 ANKRD49Q8WVL7 239 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 SLC44A1Q8WWI5 657 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 MAP3K3Q99759 626 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 TXLNGYQ9BZA5 131 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 VPS11Q9H270 941 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 SPHK1Q9NYA1 384 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 UTP6Q9NYH9 597 aaKnown RBP14.11□□□□□ -0.15
SGCE-204ENST00000428696 ACTR10Q9NZ32 417 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 OR6C2Q9NZP2 312 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.11□□□□□ -0.15
SGCE-204ENST00000428696 CTNNAL1Q9UBT7 734 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 PISDQ9UG56 409 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 MSRB2Q9Y3D2 182 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 LOXL2Q9Y4K0 774 aa14.11□□□□□ -0.15
SGCE-204ENST00000428696 CCDC187A0A096LP49 1063 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 NPEPPSL1A6NEC2 478 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 EFCAB7A8K855 629 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 CDC7O00311 574 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 RASGRF2O14827 1237 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 MAP3K7O43318 606 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 KRT38O76015 456 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 ABHD2P08910 425 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 ZNF37AP17032 561 aaPredicted RBP14.1□□□□□ -0.15
SGCE-204ENST00000428696 RBMS1P29558 406 aaKnown RBP14.1□□□□□ -0.15
SGCE-204ENST00000428696 PRDX3P30048 256 aaKnown RBP14.1□□□□□ -0.15
SGCE-204ENST00000428696 CCKBRP32239 447 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 GMPRP36959 345 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 KPNA2P52292 529 aaKnown RBP14.1□□□□□ -0.15
SGCE-204ENST00000428696 PDX1P52945 283 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 GABREP78334 506 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 CSHL1Q14406 222 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 C16orf72Q14CZ0 275 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.1□□□□□ -0.15
SGCE-204ENST00000428696 THEMIS2Q5TEJ8 643 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 FRA10AC1Q70Z53 315 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 TBC1D1Q86TI0 1168 aaPredicted RBP14.1□□□□□ -0.15
SGCE-204ENST00000428696 FAM20CQ8IXL6 584 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 SYTL1Q8IYJ3 562 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 ADGRF3Q8IZF5 1079 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 PPFIBP2Q8ND30 876 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 AGBL5Q8NDL9 886 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 WDR36Q8NI36 951 aaKnown RBP14.1□□□□□ -0.15
SGCE-204ENST00000428696 PPM1MQ96MI6 270 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 MCMBPQ9BTE3 642 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 ACAT2Q9BWD1 397 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 PARVBQ9HBI1 364 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 SOHLH2Q9NX45 425 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 ARL15Q9NXU5 204 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 TBK1Q9UHD2 729 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 NCOR2Q9Y618 2525 aa14.1□□□□□ -0.15
SGCE-204ENST00000428696 IGHV5-51A0A0C4DH38 117 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 PMS2P1A4D2B8 440 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 FAM221BA6H8Z2 402 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 SLC9B1P1A6NJY1 282 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 GFYI3L273 518 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 EIF3FO00303 357 aaPredicted RBP14.09□□□□□ -0.15
SGCE-204ENST00000428696 PLD2O14939 933 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 TNFSF15O95150 251 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 SHBGP04278 402 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 THRAP10827 490 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 CCL4P13236 92 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 ITIH1P19827 911 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 PKLRP30613 574 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 HSD17B3P37058 310 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 SLCO1A2P46721 670 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 SERPINB9P50453 376 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 FOXM1Q08050 763 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 IFFO1Q0D2I5 559 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms