RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 USB1Q9BQ65 265 aaKnown RBP7.08□□□□□ -1.28
CNOT4-206ENST00000428680 FEM1AQ9BSK4 669 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 SLITRK2Q9H156 845 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 PALMDQ9NP74 551 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 TM7SF3Q9NS93 570 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 NKIRAS2Q9NYR9 191 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 ENOPH1Q9UHY7 261 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 CDC7O00311 574 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 SEC24DO94855 1032 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-206ENST00000428680 CYP11A1P05108 521 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 ASMTP46597 345 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 CLNS1AP54105 237 aaKnown RBP7.08□□□□□ -1.28
CNOT4-206ENST00000428680 SMIM11AP58511 58 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 IRX1P78414 480 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-206ENST00000428680 TBL3Q12788 808 aaKnown RBP7.08□□□□□ -1.28
CNOT4-206ENST00000428680 CSRP2Q16527 193 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 BTN2A1Q7KYR7 527 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 VASH1Q7L8A9 365 aaPredicted RBP7.08□□□□□ -1.28
CNOT4-206ENST00000428680 FAM220AQ7Z4H9 259 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 C7orf57Q8NEG2 295 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 FBXO25Q8TCJ0 367 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 PTCD2Q8WV60 388 aaKnown RBP7.08□□□□□ -1.28
CNOT4-206ENST00000428680 EME1Q96AY2 570 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 MYADMQ96S97 322 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 FAM86C1Q9NVL1 165 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 DNAAF2Q9NVR5 837 aaKnown RBP7.08□□□□□ -1.28
CNOT4-206ENST00000428680 MTO1Q9Y2Z2 717 aaKnown RBP7.08□□□□□ -1.28
CNOT4-206ENST00000428680 CACNA1BQ00975 2339 aa7.08□□□□□ -1.28
CNOT4-206ENST00000428680 AHCTF1Q8WYP5 2266 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 BCLAF3A2AJT9 711 aaKnown RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 SLC30A4O14863 429 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 DLX3O60479 287 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 KRT8P05787 483 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 PRKCIP41743 596 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 PLP2Q04941 152 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 LGALS3BPQ08380 585 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 SLC10A7Q0GE19 358 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 DNAL1Q4LDG9 190 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 TCTE1Q5JU00 501 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 RNASEH2BQ5TBB1 312 aaKnown RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ZNF783Q6ZMS7 281 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 NPAS3Q8IXF0 933 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 SLC5A8Q8N695 610 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 SHKBP1Q8TBC3 707 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 DTX3LQ8TDB6 740 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 DCAKDQ8WVC6 231 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 TRMT2BQ96GJ1 504 aaKnown RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ATP6V1G3Q96LB4 118 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 TSSK3Q96PN8 268 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 EFCAB11Q9BUY7 163 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 SLC46A2Q9BY10 475 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 LRIT1Q9P2V4 623 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 DNMT3BQ9UBC3 853 aaKnown RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 KMT2EQ8IZD2 1858 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 H0Y3Z8 333 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 AGPSO00116 658 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 TK2O00142 265 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 KDELR3O43731 214 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 MGRN1O60291 552 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 SOCS5O75159 536 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 LRCH4O75427 683 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ALBP02768 609 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 CYP1A2P05177 515 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ANXA4P09525 319 aaPredicted RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 SP9P0CG40 484 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ATP1B2P14415 290 aaPredicted RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ATP6V1B2P21281 511 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 MPIP34949 423 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 RAB8AP61006 207 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 BTN3A2P78410 334 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 TMEM115Q12893 351 aaPredicted RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 TRAF2Q12933 501 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ITIH4Q14624 930 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 HNRNPA1L2Q32P51 320 aaKnown RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 CDKAL1Q5VV42 579 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 TYW3Q6IPR3 259 aaKnown RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 CEACAM20Q6UY09 585 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ADGRD2Q7Z7M1 963 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 SNX32Q86XE0 403 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 NSMCE2Q96MF7 247 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 NSMCE3Q96MG7 304 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ALG2Q9H553 416 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 Q9N2J8 555 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 EPHA6Q9UF33 1036 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 SRPK3Q9UPE1 567 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 CORO2BQ9UQ03 480 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 C15orf38-AP3S2A0A0A6YYH1 394 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 KLHL33A6NCF5 533 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ANKRD66B4E2M5 251 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 TFECO14948 347 aaPredicted RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 MAGEB3O15480 346 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 CLDN9O95484 217 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 MPSTP25325 297 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ZNF41P51814 821 aaPredicted RBP7.07□□□□□ -1.28
CNOT4-206ENST00000428680 NR1D2Q14995 579 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 DECR1Q16698 335 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 PKDCCQ504Y2 493 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 VWA2Q5GFL6 755 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 ARPINQ7Z6K5 226 aa7.07□□□□□ -1.28
CNOT4-206ENST00000428680 LDB1Q86U70 411 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms