RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PPP6CO00743 305 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 TMCC2O75069 709 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 DAB1O75553 588 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 TNNC2P02585 160 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 MT-ND2P03891 347 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 ANXA6P08133 673 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 SPNP16150 400 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 CLK3P49761 638 aaKnown RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 AMHR2Q16671 573 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 TBRG1Q3YBR2 411 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 RNF19BQ6ZMZ0 732 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 EFL1Q7Z2Z2 1120 aaKnown RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 FAM131BQ86XD5 332 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 CCDC103Q8IW40 242 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 MICU2Q8IYU8 434 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 TWIST2Q8WVJ9 160 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 PGLYRP2Q96PD5 576 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 SEPHS2Q99611 448 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 IRF2BPLQ9H1B7 796 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 ACTR8Q9H981 624 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 TIGARQ9NQ88 270 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 EYSQ5T1H1 3165 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 TANC2Q9HCD6 1990 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 A0A096LPI6 279 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 NR5A2O00482 541 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 ONECUT3O60422 494 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 ERN1O75460 977 aaKnown RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 ARHGEF15O94989 841 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 PDGFAP04085 211 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 C21orf33P30042 268 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 ADRA1AP35348 466 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 SLC1A2P43004 574 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 TIAL1Q01085 375 aaKnown RBP eCLIP5.04□□□□□ -1.61e-6■■□□□ 13.3
RIF1-203ENST00000428287 TRIP4Q15650 581 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 SEZ6Q53EL9 994 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 SETMARQ53H47 684 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 TRAPPC3LQ5T215 181 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 ZNF555Q8NEP9 628 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 OR10Z1Q8NGY1 313 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 DNAJB8Q8NHS0 232 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 PTERQ96BW5 349 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 PHF21BQ96EK2 531 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 VPS35Q96QK1 796 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 HEXA-AS1Q9H8Q6 139 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 ZNF408Q9H9D4 720 aa5.04□□□□□ -1.6
RIF1-203ENST00000428287 RPRD1BQ9NQG5 326 aaKnown RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 PRMT7Q9NVM4 692 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 CAB39Q9Y376 341 aaPredicted RBP5.04□□□□□ -1.6
RIF1-203ENST00000428287 A0A1B0GTL3 188 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 FAM170BA6NMN3 283 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 CYP7B1O75881 506 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 OR2B3O76000 313 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 MAPK10P53779 464 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 OR2B6P58173 313 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 EEF1DP3Q658K8 133 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 FAM122CQ6P4D5 195 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 DBX2Q6ZNG2 339 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 PDZD4Q76G19 769 aaPredicted RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 KDELC2Q7Z4H8 507 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 NECAB2Q7Z6G3 386 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 ADCK1Q86TW2 530 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 OR5K1Q8NHB7 308 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 C9orf43Q8TAL5 461 aaPredicted RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 WNT8BQ93098 351 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 TADA1Q96BN2 335 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 ZNF382Q96SR6 550 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 TDRD3Q9H7E2 651 aaKnown RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 ACSS2Q9NR19 701 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 MED9Q9NWA0 146 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 SCN3BQ9NY72 215 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 GLTPQ9NZD2 209 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 ZNF175Q9Y473 711 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 MOXD2PA6NHM9 499 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 LRIG2O94898 1065 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 H2AFB1P0C5Y9 115 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 H2AFB2P0C5Z0 115 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 MSH3P20585 1137 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 APLP1P51693 650 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 EPHA4P54764 986 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 NPRL3Q12980 569 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 METTL2BQ6P1Q9 378 aaKnown RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 SYVN1Q86TM6 617 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 HORMAD1Q86X24 394 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 HS3ST5Q8IZT8 346 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 CDCA5Q96FF9 252 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 ACOX2Q99424 681 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 PLEKHA5Q9HAU0 1116 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 RBFOX1Q9NWB1 397 aaKnown RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 SZT2Q5T011 3432 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 YDJCA8MPS7 323 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 WASH4PA8MWX3 477 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 POLRMTO00411 1230 aaKnown RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 NFICP08651 508 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 ARSAP15289 507 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 TNFSF8P32971 234 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 HTR7P34969 479 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 RBP5P82980 135 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 ABHD18Q0P651 414 aa5.03□□□□□ -1.6
RIF1-203ENST00000428287 BAATQ14032 418 aaPredicted RBP5.03□□□□□ -1.6
RIF1-203ENST00000428287 RPS6KA2Q15349 733 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms