RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 KCNJ11Q14654 390 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 TMED2Q15363 201 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 UGT8Q16880 541 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 IZUMO3Q5VZ72 239 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 CPZQ66K79 652 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 LRRC8BQ6P9F7 803 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 FAM198BQ6UWH4 519 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 TAX1BP1Q86VP1 789 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 SYTL1Q8IYJ3 562 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 MPP5Q8N3R9 675 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 C2orf73Q8N5S3 287 aaPredicted RBP17.77■□□□□ 0.44
PSPC1-202ENST00000427943 ENDOVQ8N8Q3 282 aaKnown RBP17.77■□□□□ 0.44
PSPC1-202ENST00000427943 ASZ1Q8WWH4 475 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 IL17FQ96PD4 163 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 KIFC1Q9BW19 673 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 OR6C2Q9NZP2 312 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 GNPTGQ9UJJ9 305 aa17.77■□□□□ 0.44
PSPC1-202ENST00000427943 PCSK5Q92824 1860 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 MKRN2OSH3BPM6 223 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 ZNF749O43361 778 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 KDM1AO60341 852 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 AVILO75366 819 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 RECKO95980 971 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 CTSBP07858 339 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 CDK16Q00536 496 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 TLE1Q04724 770 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 CHAF1BQ13112 559 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 ANKRD22Q5VYY1 191 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 DCUN1D3Q8IWE4 304 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 LINC01555Q8NAE3 123 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 TCTN2Q96GX1 697 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 PANX3Q96QZ0 392 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 TRIM56Q9BRZ2 755 aaKnown RBP17.76■□□□□ 0.43
PSPC1-202ENST00000427943 TRIM55Q9BYV6 548 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 EPN3Q9H201 632 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 CLMPQ9H6B4 373 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 MRM3Q9HC36 420 aaKnown RBP17.76■□□□□ 0.43
PSPC1-202ENST00000427943 TSR3Q9UJK0 312 aaKnown RBP17.76■□□□□ 0.43
PSPC1-202ENST00000427943 SOX13Q9UN79 622 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 SNX7Q9UNH6 387 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 RUVBL2Q9Y230 463 aaKnown RBP17.76■□□□□ 0.43
PSPC1-202ENST00000427943 KLHL20Q9Y2M5 609 aa17.76■□□□□ 0.43
PSPC1-202ENST00000427943 NUP210LQ5VU65 1888 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 OR2B3O76000 313 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 TMEM63AO94886 807 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 KRT14P02533 472 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 BDKRB1P46663 353 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 GABRA4P48169 554 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 RAB28P51157 221 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 GRB7Q14451 532 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 KIR2DS3Q14952 304 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 KYNUQ16719 465 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 SLC5A12Q1EHB4 618 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 CTSL3PQ5NE16 218 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 UNC5DQ6UXZ4 953 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 GPR135Q8IZ08 494 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 RASGEF1CQ8N431 466 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 SKA2Q8WVK7 121 aaPredicted RBP17.75■□□□□ 0.43
PSPC1-202ENST00000427943 SEC14L1Q92503 715 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 MAGOHBQ96A72 148 aaKnown RBP17.75■□□□□ 0.43
PSPC1-202ENST00000427943 MENTQ9BUN1 341 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 SPRTNQ9H040 489 aaPredicted RBP17.75■□□□□ 0.43
PSPC1-202ENST00000427943 TLK1Q9UKI8 766 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 NFS1Q9Y697 457 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 PCM1Q15154 2024 aa17.75■□□□□ 0.43
PSPC1-202ENST00000427943 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.74■□□□□ 0.43
PSPC1-202ENST00000427943 KRT87PA6NCN2 255 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 ARGFXA6NJG6 315 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 SLCO2B1O94956 709 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 RPN2P04844 631 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 CAPN1P07384 714 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 RAB40ALP0C0E4 278 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 MAGP20916 626 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 RPS3P23396 243 aaKnown RBP eCLIP17.74■□□□□ 0.43
PSPC1-202ENST00000427943 PTGIRP43119 386 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 KCNC4Q03721 635 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 C1orf189Q5VU69 101 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 CASC4Q6P4E1 433 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 APLFQ8IW19 511 aaPredicted RBP17.74■□□□□ 0.43
PSPC1-202ENST00000427943 GSDMBQ8TAX9 411 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 FAM136AQ96C01 138 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 NLNQ9BYT8 704 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 IRAK4Q9NWZ3 460 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 IL1RAPL1Q9NZN1 696 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 TCFL5Q9UL49 500 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 JRKLQ9Y4A0 524 aa17.74■□□□□ 0.43
PSPC1-202ENST00000427943 UBR5O95071 2799 aaPredicted RBP17.74■□□□□ 0.43
PSPC1-202ENST00000427943 SETXQ7Z333 2677 aaKnown RBP17.73■□□□□ 0.43
PSPC1-202ENST00000427943 H3BMH7 237 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 GOLGA8MH3BSY2 632 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 NIPSNAP2O75323 286 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 CBSLP0DN79 551 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 CD9P21926 228 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 FMO4P31512 558 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 CBSP35520 551 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 MAGEA6P43360 314 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 CSRP3P50461 194 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 TYSND1Q2T9J0 566 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 CCSMST1Q4G0I0 132 aa17.73■□□□□ 0.43
PSPC1-202ENST00000427943 ZNF385CQ66K41 422 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms