RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 AIF1P55008 147 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 CDH8P55286 799 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 PRMT2P55345 433 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 RAB10P61026 200 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 PSMC6P62333 389 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 PPP3R1P63098 170 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 CCNA1P78396 465 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 TFAMQ00059 246 aaKnown RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 CAP1Q01518 475 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 POU4F1Q01851 419 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 POU5F1BQ06416 359 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 IFRD2Q12894 506 aaPredicted RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SP140Q13342 867 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 C1DQ13901 141 aaKnown RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 EMC2Q15006 297 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SF3A2Q15428 464 aaKnown RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 TSNQ15631 228 aaKnown RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 MEP1AQ16819 746 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 PFKFB4Q16877 469 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 TATDN3Q17R31 274 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 KCTD19Q17RG1 926 aaPredicted RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 HKDC1Q2TB90 917 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 PAN2Q504Q3 1202 aaKnown RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 LBHQ53QV2 105 aaPredicted RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM209BQ5JX69 171 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 DGKKQ5KSL6 1271 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 C1orf220Q5T0J3 134 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 KIAA1614Q5VZ46 1190 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 CD276Q5ZPR3 534 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 FSTL4Q6MZW2 842 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 PMF1Q6P1K2 205 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 TATDN1Q6P1N9 297 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 DENND1BQ6P3S1 775 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ERICH5Q6P6B1 374 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 TXNDC11Q6PKC3 985 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 C15orf39Q6ZRI6 1047 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 RASSF6Q6ZTQ3 369 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM92BQ6ZTR7 304 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 CHST15Q7LFX5 561 aaPredicted RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC46A3Q7Z3Q1 461 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 KDELC2Q7Z4H8 507 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 FBXO33Q7Z6M2 555 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 LRRTM3Q86VH5 581 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 TMEM17Q86X19 198 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 MIB1Q86YT6 1006 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZDHHC17Q8IUH5 632 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 PSTKQ8IV42 348 aaKnown RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 RIMKLAQ8IXN7 391 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZZZ3Q8IYH5 903 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SPAG16Q8N0X2 631 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 LRRC71Q8N4P6 559 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 CLDN22Q8N7P3 220 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 EFHBQ8N7U6 833 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF366Q8N895 744 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 C2orf69Q8N8R5 385 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ATG16L2Q8NAA4 619 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZBTB44Q8NCP5 570 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 FAM83FQ8NEG4 500 aaPredicted RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 DUSP18Q8NEJ0 188 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 MCPH1Q8NEM0 835 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 RDM1Q8NG50 284 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 OR1M1Q8NGA1 313 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 OR6S1Q8NH40 331 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 AGR3Q8TD06 166 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 BTN2A2Q8WVV5 523 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF606Q8WXB4 792 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 CRYGNQ8WXF5 182 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SEMA4DQ92854 862 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 KIAA1191Q96A73 305 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 EXOC2Q96KP1 924 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SPATA13Q96N96 652 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC9A7Q96T83 725 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 INSM2Q96T92 566 aaPredicted RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZBTB18Q99592 522 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SLC30A3Q99726 388 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 CBWD1Q9BRT8 395 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 TBCDQ9BTW9 1192 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 C1QTNF1Q9BXJ1 281 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ACTR6Q9GZN1 396 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 MED28Q9H204 178 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 PCIF1Q9H4Z3 704 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ANKRA2Q9H9E1 313 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SDR39U1Q9NRG7 319 aaPredicted RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 PLSCR3Q9NRY6 295 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 RASSF1Q9NS23 344 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ANKEF1Q9NU02 776 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 DPP3Q9NY33 737 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZIM2Q9NZV7 527 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 MALT1Q9UDY8 824 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 EPHA6Q9UF33 1036 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 PRKAG2Q9UGJ0 569 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SFMBT1Q9UHJ3 866 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 NUFIP1Q9UHK0 495 aaKnown RBP5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZDHHC2Q9UIJ5 367 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 TBC1D24Q9ULP9 559 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 SPATA2Q9UM82 520 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 TBX20Q9UMR3 447 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 COPS3Q9UNS2 423 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 GINS2Q9Y248 185 aa5.5□□□□□ -1.53
VTI1BP4-201ENST00000427516 ZNF330Q9Y3S2 320 aaPredicted RBP5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms