RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 STK40Q8N2I9 435 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 MAL2Q969L2 176 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 SORBS1Q9BX66 1292 aaKnown RBP11.63□□□□□ -0.55
PTPRN-204ENST00000423636 RC3H2Q9HBD1 1191 aaKnown RBP11.63□□□□□ -0.55
PTPRN-204ENST00000423636 PRDM8Q9NQV8 689 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 TM7SF3Q9NS93 570 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 BCAP29Q9UHQ4 241 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 PABPN1LA6NDY0 278 aaKnown RBP11.63□□□□□ -0.55
PTPRN-204ENST00000423636 ZBTB11O95625 1053 aaPredicted RBP11.63□□□□□ -0.55
PTPRN-204ENST00000423636 PGRP06401 933 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 ANXA5P08758 320 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 MSH3P20585 1137 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 NSG1P42857 185 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 TXNDC11Q6PKC3 985 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 TMEM220Q6QAJ8 160 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 ZNF621Q6ZSS3 439 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 HMGN2P46Q86SG4 172 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 ZFAND4Q86XD8 727 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 MMP21Q8N119 569 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 PEX13Q92968 403 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 FAM162AQ96A26 154 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 NSMCE2Q96MF7 247 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 BARD1Q99728 777 aaKnown RBP11.63□□□□□ -0.55
PTPRN-204ENST00000423636 EFHD1Q9BUP0 239 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 OR2AG1Q9H205 316 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 C11orf49Q9H6J7 331 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 ADGRE2Q9UHX3 823 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 SH2B3Q9UQQ2 575 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 PCDHB14Q9Y5E9 798 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 DLGAP1O14490 977 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 LIN7AO14910 233 aaPredicted RBP11.63□□□□□ -0.55
PTPRN-204ENST00000423636 PRKD3O94806 890 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 ETHE1O95571 254 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 ATP1B2P14415 290 aaPredicted RBP11.63□□□□□ -0.55
PTPRN-204ENST00000423636 CD22P20273 847 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 GNPDA1P46926 289 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 SYTL3Q4VX76 610 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 LILRA6Q6PI73 481 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 TTC33Q6PID6 262 aaPredicted RBP11.63□□□□□ -0.55
PTPRN-204ENST00000423636 ZNF740Q8NDX6 193 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 TSPAN14Q8NG11 270 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 SLC13A3Q8WWT9 602 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 ROPN1LQ96C74 230 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 ZDHHC7Q9NXF8 308 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 ERVK-11Q9UQG0 969 aa11.63□□□□□ -0.55
PTPRN-204ENST00000423636 MYO1GB0I1T2 1018 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 H7C0S8 307 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 hCG_2039718K7EN88 272 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 SLC22A2O15244 555 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 KIF1CO43896 1103 aaKnown RBP11.62□□□□□ -0.55
PTPRN-204ENST00000423636 OLFM2O95897 454 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 SLC16A8O95907 504 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 FGBP02675 491 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 CYP4F2P78329 520 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 GTF2H3Q13889 308 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 INPP5AQ14642 412 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 CATSPEREQ5SY80 951 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 C8orf82Q6P1X6 216 aaPredicted RBP11.62□□□□□ -0.55
PTPRN-204ENST00000423636 SPESP1Q6UW49 350 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 ERMP1Q7Z2K6 904 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 MMAAQ8IVH4 418 aaKnown RBP11.62□□□□□ -0.55
PTPRN-204ENST00000423636 C7orf61Q8IZ16 206 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 HOPXQ9BPY8 73 aaPredicted RBP11.62□□□□□ -0.55
PTPRN-204ENST00000423636 ADNPQ9H2P0 1102 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 ZDHHC3Q9NYG2 299 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 ANAPC2Q9UJX6 822 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 BTBD3Q9Y2F9 522 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 TDRKHQ9Y2W6 561 aaKnown RBP11.62□□□□□ -0.55
PTPRN-204ENST00000423636 OARD1Q9Y530 152 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 PCDHB1Q9Y5F3 818 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 CLDN9O95484 217 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 POP4O95707 220 aaKnown RBP11.62□□□□□ -0.55
PTPRN-204ENST00000423636 NUDT7P0C024 238 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 IL7RP16871 459 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 IRF8Q02556 426 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 CAMK1Q14012 370 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 GRM2Q14416 872 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.62□□□□□ -0.55
PTPRN-204ENST00000423636 CERS6Q6ZMG9 384 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 CYP2U1Q7Z449 544 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 TRMT11Q7Z4G4 463 aaKnown RBP11.62□□□□□ -0.55
PTPRN-204ENST00000423636 NECAB2Q7Z6G3 386 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 MSRB3Q8IXL7 192 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 SYTL1Q8IYJ3 562 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 MINDY1Q8N5J2 469 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 RASGEF1AQ8N9B8 481 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 OR2T12Q8NG77 320 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 FRS2Q8WU20 508 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 AP2M1Q96CW1 435 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 HIC2Q96JB3 615 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 ASB2Q96Q27 587 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 NAA50Q9GZZ1 169 aaKnown RBP11.62□□□□□ -0.55
PTPRN-204ENST00000423636 Q9H521 79 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 CCM2LQ9NUG4 571 aaPredicted RBP11.62□□□□□ -0.55
PTPRN-204ENST00000423636 OLAHQ9NV23 265 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 MOSPD1Q9UJG1 213 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 PPT2Q9UMR5 302 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 ERVW-1Q9UQF0 538 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 ZNF451Q9Y4E5 1061 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms