RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 ELOVL6Q9H5J4 265 aa11.63□□□□□ -0.55
LIMK1-202ENST00000418310 TMEM189-UBE2V1I3L0A0 370 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 TULP3O75386 442 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 HTR1AP08908 422 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 HTR1BP28222 390 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 EPHA2P29317 976 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 S100A3P33764 101 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 ATN1P54259 1190 aaPredicted RBP11.62□□□□□ -0.55
LIMK1-202ENST00000418310 CD300CQ08708 224 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 TRAF7Q6Q0C0 670 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 EID3Q8N140 333 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 DPP10Q8N608 796 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 LMNTD1Q8N9Z9 388 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 C1QTNF3Q9BXJ4 246 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 ACPTQ9BZG2 426 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 CD244Q9BZW8 370 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 MUC13Q9H3R2 512 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 AMBNQ9NP70 447 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 PAK1IP1Q9NWT1 392 aaPredicted RBP11.62□□□□□ -0.55
LIMK1-202ENST00000418310 TRNAU1APQ9NX07 287 aaKnown RBP11.62□□□□□ -0.55
LIMK1-202ENST00000418310 GNPTGQ9UJJ9 305 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 CDH23Q9H251 3354 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 IFRD1O00458 451 aaPredicted RBP11.62□□□□□ -0.55
LIMK1-202ENST00000418310 MANBAO00462 879 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 ABCB7O75027 752 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 ATP6V1G1O75348 118 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 WDR47O94967 919 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 NTRK1P04629 796 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 PSMB9P28065 219 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 HMGCLP35914 325 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 DCTP40126 519 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 HALP42357 657 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 RPIAP49247 311 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 ALDH7A1P49419 539 aaKnown RBP11.62□□□□□ -0.55
LIMK1-202ENST00000418310 CYP4F8P98187 520 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 PCBP2Q15366 365 aaKnown RBP eCLIP11.62□□□□□ -0.55
LIMK1-202ENST00000418310 ZNF648Q5T619 568 aaPredicted RBP11.62□□□□□ -0.55
LIMK1-202ENST00000418310 ZCCHC8Q6NZY4 707 aaKnown RBP11.62□□□□□ -0.55
LIMK1-202ENST00000418310 ZSWIM9Q86XI8 627 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 MICU2Q8IYU8 434 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 RBFAQ8N0V3 343 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 CENPSQ8N2Z9 138 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 PDPRQ8NCN5 879 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 GLMNQ92990 594 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 BORCS5Q969J3 196 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 RHBDF1Q96CC6 855 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 TMEM165Q9HC07 324 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 DNAJB9Q9UBS3 223 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 ABCG2Q9UNQ0 655 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 LOC100130705A0A1B0GUX0 176 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 GAPDHSO14556 408 aaPredicted RBP11.62□□□□□ -0.55
LIMK1-202ENST00000418310 PER2O15055 1255 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 STK16O75716 305 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 FADS2O95864 444 aaKnown RBP11.62□□□□□ -0.55
LIMK1-202ENST00000418310 DGKAP23743 735 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 CLCN4P51793 760 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 OCA2Q04671 838 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 CYP2A13Q16696 494 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 EGFLAMQ63HQ2 1017 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 ZNF621Q6ZSS3 439 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 UTS2BQ765I0 119 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 STK40Q8N2I9 435 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 BEND7Q8N7W2 519 aaPredicted RBP11.62□□□□□ -0.55
LIMK1-202ENST00000418310 APIPQ96GX9 242 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 TPD52L3Q96J77 140 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 SPATA17Q96L03 361 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 RAD21L1Q9H4I0 556 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 RIMKLBQ9ULI2 386 aa11.62□□□□□ -0.55
LIMK1-202ENST00000418310 TRIM64CA6NLI5 447 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 CFAP99D6REC4 459 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 ABCB1P08183 1280 aaPredicted RBP11.61□□□□□ -0.55
LIMK1-202ENST00000418310 HMGA1P17096 107 aaKnown RBP11.61□□□□□ -0.55
LIMK1-202ENST00000418310 JAK1P23458 1154 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 OPRL1P41146 370 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 CTSOP43234 321 aaPredicted RBP11.61□□□□□ -0.55
LIMK1-202ENST00000418310 RPS14P62263 151 aaKnown RBP11.61□□□□□ -0.55
LIMK1-202ENST00000418310 GRIK2Q13002 908 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 DPY19L1Q2PZI1 675 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 TMEM236Q5W0B7 351 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 TTC23Q5W5X9 447 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 CEP68Q76N32 757 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 HS6ST3Q8IZP7 471 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 ARL10Q8N8L6 244 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 GPR26Q8NDV2 337 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 PIH1D2Q8WWB5 315 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 MTERF1Q99551 399 aaKnown RBP11.61□□□□□ -0.55
LIMK1-202ENST00000418310 EPS8L2Q9H6S3 715 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 CHCHD3Q9NX63 227 aaKnown RBP11.61□□□□□ -0.55
LIMK1-202ENST00000418310 ERVK-18Q9QC07 812 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 SLC22A14Q9Y267 594 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 SH3BP1Q9Y3L3 701 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 CPQQ9Y646 472 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 NPIPB15A6NHN6 443 aaPredicted RBP11.61□□□□□ -0.55
LIMK1-202ENST00000418310 BCKDKO14874 412 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 PQBP1O60828 265 aaKnown RBP11.61□□□□□ -0.55
LIMK1-202ENST00000418310 PGLSO95336 258 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 IGHA2P01877 340 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 FUCA1P04066 466 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 CKMP06732 381 aa11.61□□□□□ -0.55
LIMK1-202ENST00000418310 VBP1P61758 197 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms