RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 OR56A3Q8NH54 315 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 HOPXQ9BPY8 73 aaPredicted RBP16.35■□□□□ 0.21
SSBP3-205ENST00000417664 MKRN2Q9H000 416 aaKnown RBP16.35■□□□□ 0.21
SSBP3-205ENST00000417664 PREBQ9HCU5 417 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 SPAG4Q9NPE6 437 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 GID8Q9NWU2 228 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 STOX2Q9P2F5 926 aaPredicted RBP16.35■□□□□ 0.21
SSBP3-205ENST00000417664 FAM8A1Q9UBU6 413 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 SERGEFQ9UGK8 458 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 CROTQ9UKG9 612 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 ZNF490Q9ULM2 529 aaPredicted RBP16.35■□□□□ 0.21
SSBP3-205ENST00000417664 FZD4Q9ULV1 537 aa16.35■□□□□ 0.21
SSBP3-205ENST00000417664 KCNE1BA0A087WTH5 132 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 A0A1W2PQF6 199 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 FAM234BA2RU67 622 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 PDE5AO76074 875 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 EGFP01133 1207 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 PCCBP05166 539 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 ME2P23368 584 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 GCKP35557 465 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 PSME3P61289 254 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 AP2B1P63010 937 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 FOXM1Q08050 763 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 PRKG2Q13237 762 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 ADGRE1Q14246 886 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 PON2Q15165 354 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 IMPG1Q17R60 797 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 KIAA1211LQ6NV74 962 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 C8orf82Q6P1X6 216 aaPredicted RBP16.34■□□□□ 0.21
SSBP3-205ENST00000417664 USP30Q70CQ3 517 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 C11orf96Q7Z7L8 435 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 AMZ2Q86W34 360 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 FAM9CQ8IZT9 166 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 OXR1Q8N573 874 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 LILRA3Q8N6C8 439 aaPredicted RBP16.34■□□□□ 0.21
SSBP3-205ENST00000417664 GANCQ8TET4 914 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 ASB12Q8WXK4 309 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 ELOVL6Q9H5J4 265 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 WDR26Q9H7D7 661 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 ITM2CQ9NQX7 267 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 PHPT1Q9NRX4 125 aaPredicted RBP16.34■□□□□ 0.21
SSBP3-205ENST00000417664 GPRC5BQ9NZH0 403 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 EIF3LQ9Y262 564 aaKnown RBP16.34■□□□□ 0.21
SSBP3-205ENST00000417664 L3MBTL1Q9Y468 752 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 PCDHGA7Q9Y5G6 932 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 A0A1W2PP18 115 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 NR5A2O00482 541 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 FFAR3O14843 346 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 GPR42O15529 346 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 ADAM23O75077 832 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 KLF8O95600 359 aaPredicted RBP16.34■□□□□ 0.21
SSBP3-205ENST00000417664 NPPAP01160 153 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 JUPP14923 745 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 IGFBP4P22692 258 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 PRPH2P23942 346 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 RCN1Q15293 331 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 ZNF423Q2M1K9 1284 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 SPATS1Q496A3 300 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 TMEM259Q4ZIN3 620 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 CHRDL2Q6WN34 429 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 THOC6Q86W42 341 aaKnown RBP16.34■□□□□ 0.21
SSBP3-205ENST00000417664 SLC44A3Q8N4M1 653 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 PYCR2Q96C36 320 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 SPDL1Q96EA4 605 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 PKP4Q99569 1192 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 ATG10Q9H0Y0 220 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 TTYH1Q9H313 450 aaPredicted RBP16.34■□□□□ 0.21
SSBP3-205ENST00000417664 KCNK12Q9HB15 430 aa16.34■□□□□ 0.21
SSBP3-205ENST00000417664 NKX1-2Q9UD57 310 aaPredicted RBP16.34■□□□□ 0.21
SSBP3-205ENST00000417664 ZFR2Q9UPR6 939 aaKnown RBP16.34■□□□□ 0.21
SSBP3-205ENST00000417664 COL4A2P08572 1712 aa16.33■□□□□ 0.21
SSBP3-205ENST00000417664 REV3LO60673 3130 aa16.33■□□□□ 0.21
SSBP3-205ENST00000417664 ZFC3H1O60293 1989 aaKnown RBP16.33■□□□□ 0.2
SSBP3-205ENST00000417664 A0A1W2PPC1 479 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 C2CD4DB7Z1M9 353 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 TRIM38O00635 465 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 KMOO15229 486 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 CFLARO15519 480 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 RSL1D1O76021 490 aaKnown RBP16.33■□□□□ 0.2
SSBP3-205ENST00000417664 SLC16A8O95907 504 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 ACPPP15309 386 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 ACADLP28330 430 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 IMPA1P29218 277 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 HNF4AP41235 474 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 POLR2JP52435 117 aaKnown RBP16.33■□□□□ 0.2
SSBP3-205ENST00000417664 SMAD4Q13485 552 aaKnown RBP16.33■□□□□ 0.2
SSBP3-205ENST00000417664 NAE1Q13564 534 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 CPSF6Q16630 551 aaKnown RBP eCLIP16.33■□□□□ 0.2
SSBP3-205ENST00000417664 CRTC3Q6UUV7 619 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 ZFAND4Q86XD8 727 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 CACUL1Q86Y37 369 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 MINDY1Q8N5J2 469 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 TP53I13Q8NBR0 393 aaPredicted RBP16.33■□□□□ 0.2
SSBP3-205ENST00000417664 OR14C36Q8NHC7 312 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 SELENOMQ8WWX9 145 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 CCDC124Q96CT7 223 aaKnown RBP16.33■□□□□ 0.2
SSBP3-205ENST00000417664 ERLEC1Q96DZ1 483 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 ANKRD27Q96NW4 1050 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 OR52A5Q9H2C5 316 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 RMI1Q9H9A7 625 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms