RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 CDH18Q13634 790 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 PGS1Q32NB8 556 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 USP39Q53GS9 565 aaKnown RBP14.15□□□□□ -0.14
HDAC9-208ENST00000417496 TTC23Q5W5X9 447 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 PRR23BQ6ZRT6 265 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 ZNF551Q7Z340 670 aaPredicted RBP14.15□□□□□ -0.14
HDAC9-208ENST00000417496 BTLAQ7Z6A9 289 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 ZNF554Q86TJ5 538 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 SKA2Q8WVK7 121 aaPredicted RBP14.15□□□□□ -0.14
HDAC9-208ENST00000417496 LZICQ8WZA0 190 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 BORCS5Q969J3 196 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 DCAF13Q9NV06 445 aaKnown RBP14.15□□□□□ -0.14
HDAC9-208ENST00000417496 TMEM45AQ9NWC5 275 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 OR51B4Q9Y5P0 310 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 IFRD1O00458 451 aaPredicted RBP14.15□□□□□ -0.14
HDAC9-208ENST00000417496 SLC10A3P09131 477 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 ACRV1P26436 265 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 HTR1BP28222 390 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 LRRC73Q5JTD7 316 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 CES5AQ6NT32 575 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 TRIM46Q7Z4K8 759 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 SNX20Q7Z614 316 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 MICU2Q8IYU8 434 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 MYOCQ99972 504 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 BEGAINQ9BUH8 593 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 VN1R3Q9BXE9 311 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 PARVBQ9HBI1 364 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 SERHLQ9NQF3 203 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 PSME2Q9UL46 239 aa14.15□□□□□ -0.14
HDAC9-208ENST00000417496 GLYATL1P3A0A0U1RQE8 302 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 STK16O75716 305 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 JUNBP17275 347 aaPredicted RBP14.14□□□□□ -0.15
HDAC9-208ENST00000417496 TUFMP49411 452 aaKnown RBP14.14□□□□□ -0.15
HDAC9-208ENST00000417496 ISL1P61371 349 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 SMARCB1Q12824 385 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 SIM2Q14190 667 aaPredicted RBP14.14□□□□□ -0.15
HDAC9-208ENST00000417496 SKIV2LQ15477 1246 aaKnown RBP14.14□□□□□ -0.15
HDAC9-208ENST00000417496 INO80DQ53TQ3 878 aaPredicted RBP14.14□□□□□ -0.15
HDAC9-208ENST00000417496 SLC8B1Q6J4K2 584 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 KIAA1841Q6NSI8 718 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 GPR26Q8NDV2 337 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 HDAC2Q92769 488 aaKnown RBP14.14□□□□□ -0.15
HDAC9-208ENST00000417496 FAM120BQ96EK7 910 aaKnown RBP14.14□□□□□ -0.15
HDAC9-208ENST00000417496 CLSTN3Q9BQT9 956 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 ARMC7Q9H6L4 198 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 STARD7Q9NQZ5 370 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 C1orf109Q9NX04 203 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 ARL15Q9NXU5 204 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 GPRC5BQ9NZH0 403 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 TMEFF2Q9UIK5 374 aaPredicted RBP14.14□□□□□ -0.15
HDAC9-208ENST00000417496 PLXNA4Q9HCM2 1894 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 PIKFYVEQ9Y2I7 2098 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 SLC28A1O00337 649 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 TOR1BO14657 336 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 TRBC1P01850 177 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 FTH1P02794 183 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 ITGALP20701 1170 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 GSTM2P28161 218 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 BCL2L1Q07817 233 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 ITGADQ13349 1161 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 RAPSNQ13702 412 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 MOGQ16653 247 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 RBM48Q5RL73 367 aaKnown RBP14.14□□□□□ -0.15
HDAC9-208ENST00000417496 TXNDC8Q6A555 127 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 CRTC3Q6UUV7 619 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 AADATQ8N5Z0 425 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 ARL14EPQ8N8R7 260 aaPredicted RBP14.14□□□□□ -0.15
HDAC9-208ENST00000417496 DDHD1Q8NEL9 900 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 ALG14Q96F25 216 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 RBM4BQ9BQ04 359 aaKnown RBP14.14□□□□□ -0.15
HDAC9-208ENST00000417496 RHNO1Q9BSD3 238 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 RBM4Q9BWF3 364 aaKnown RBP14.14□□□□□ -0.15
HDAC9-208ENST00000417496 BAG5Q9UL15 447 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 PPT2Q9UMR5 302 aa14.14□□□□□ -0.15
HDAC9-208ENST00000417496 TRBV5-3A0A0A0MS03 114 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 A0A1W2PQ45 241 aaPredicted RBP14.13□□□□□ -0.15
HDAC9-208ENST00000417496 A0A1W2PQY0 241 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 PER2O15055 1255 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 BCAS1O75363 584 aaPredicted RBP14.13□□□□□ -0.15
HDAC9-208ENST00000417496 ZNF682O95780 498 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 MSH3P20585 1137 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 EFNA1P20827 205 aaPredicted RBP14.13□□□□□ -0.15
HDAC9-208ENST00000417496 RPIAP49247 311 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 LSM3P62310 102 aaKnown RBP14.13□□□□□ -0.15
HDAC9-208ENST00000417496 HSPA14Q0VDF9 509 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 DCDC5Q6ZRR9 648 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 GPR149Q86SP6 731 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 DCP2Q8IU60 420 aaKnown RBP14.13□□□□□ -0.15
HDAC9-208ENST00000417496 SNX29P2Q8IUI4 249 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 TERB1Q8NA31 727 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 PJA1Q8NG27 643 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 SELENOMQ8WWX9 145 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 FKBP10Q96AY3 582 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 NRBF2Q96F24 287 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 TMEM9Q9P0T7 183 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 NPIPB15A6NHN6 443 aaPredicted RBP14.13□□□□□ -0.15
HDAC9-208ENST00000417496 SCELO95171 688 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 HPRP00739 348 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 EBLN1P0CF75 366 aa14.13□□□□□ -0.15
HDAC9-208ENST00000417496 ALDH4A1P30038 563 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms