RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 TP73O15350 636 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 VAPBO95292 243 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 ACRV1P26436 265 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 VARSP26640 1264 aaKnown RBP17.45■□□□□ 0.38
VCP-202ENST00000417448 ARNTP27540 789 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 BBS9Q3SYG4 887 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 PLEKHN1Q494U1 663 aaPredicted RBP17.45■□□□□ 0.38
VCP-202ENST00000417448 HIBCHQ6NVY1 386 aaPredicted RBP17.45■□□□□ 0.38
VCP-202ENST00000417448 TMEM26Q6ZUK4 368 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 NLRP9Q7RTR0 991 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 KIF18AQ8NI77 898 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 KLHL6Q8WZ60 621 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 ZNF669Q96BR6 464 aaPredicted RBP17.45■□□□□ 0.38
VCP-202ENST00000417448 ULK4Q96C45 1275 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 DCUN1D1Q96GG9 259 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 SNF8Q96H20 258 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 COPS8Q99627 209 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 LRRC1Q9BTT6 524 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 UCK1Q9HA47 277 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 ENTPD4Q9Y227 616 aa17.45■□□□□ 0.38
VCP-202ENST00000417448 SEC31AO94979 1220 aaKnown RBP17.44■□□□□ 0.38
VCP-202ENST00000417448 MLNP12872 115 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 SLC2A4P14672 509 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 NELFEP18615 380 aaKnown RBP17.44■□□□□ 0.38
VCP-202ENST00000417448 RPL10P27635 214 aaKnown RBP17.44■□□□□ 0.38
VCP-202ENST00000417448 MAGEA3P43357 314 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 DRG2P55039 364 aaKnown RBP17.44■□□□□ 0.38
VCP-202ENST00000417448 ITGA1P56199 1179 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 CKAP4Q07065 602 aaKnown RBP17.44■□□□□ 0.38
VCP-202ENST00000417448 NFE2L1Q14494 772 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 KCNAB1Q14722 419 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 WHAMMP3Q1A5X7 153 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 GPR33Q49SQ1 333 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 ANKRD20A4Q4UJ75 823 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 FAM69BQ5VUD6 431 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 AFTPHQ6ULP2 937 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 NAPRTQ6XQN6 538 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 FAM92BQ6ZTR7 304 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 PCGF5Q86SE9 256 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 SPNS2Q8IVW8 549 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 CISD2Q8N5K1 135 aaKnown RBP17.44■□□□□ 0.38
VCP-202ENST00000417448 LILRA3Q8N6C8 439 aaPredicted RBP17.44■□□□□ 0.38
VCP-202ENST00000417448 OTUD6BQ8N6M0 293 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 NOA1Q8NC60 698 aaKnown RBP17.44■□□□□ 0.38
VCP-202ENST00000417448 ERP44Q9BS26 406 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 CATSPERZQ9NTU4 200 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 SAMD15Q9P1V8 674 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 RIMKLBQ9ULI2 386 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 PSMD13Q9UNM6 376 aa17.44■□□□□ 0.38
VCP-202ENST00000417448 FAM187AA6NFU0 413 aa17.43■□□□□ 0.38
VCP-202ENST00000417448 A6NL46 340 aa17.43■□□□□ 0.38
VCP-202ENST00000417448 OR5K4A6NMS3 321 aa17.43■□□□□ 0.38
VCP-202ENST00000417448 KIF2AO00139 706 aaPredicted RBP17.43■□□□□ 0.38
VCP-202ENST00000417448 AP3B1O00203 1094 aa17.43■□□□□ 0.38
VCP-202ENST00000417448 CD3EAPO15446 510 aaKnown RBP17.43■□□□□ 0.38
VCP-202ENST00000417448 ATP1B2P14415 290 aaPredicted RBP17.43■□□□□ 0.38
VCP-202ENST00000417448 FOLR1P15328 257 aa17.43■□□□□ 0.38
VCP-202ENST00000417448 CAPZBP47756 277 aa17.43■□□□□ 0.38
VCP-202ENST00000417448 PPP1CAP62136 330 aa17.43■□□□□ 0.38
VCP-202ENST00000417448 TUBB3Q13509 450 aa17.43■□□□□ 0.38
VCP-202ENST00000417448 FASTKD1Q53R41 847 aaKnown RBP17.43■□□□□ 0.38
VCP-202ENST00000417448 CACHD1Q5VU97 1274 aa17.43■□□□□ 0.38
VCP-202ENST00000417448 ANKMY2Q8IV38 441 aa17.43■□□□□ 0.38
VCP-202ENST00000417448 C19orf43Q9BQ61 176 aa17.43■□□□□ 0.38
VCP-202ENST00000417448 MRM3Q9HC36 420 aaKnown RBP17.43■□□□□ 0.38
VCP-202ENST00000417448 ZNF624Q9P2J8 865 aaPredicted RBP17.43■□□□□ 0.38
VCP-202ENST00000417448 IGLV3-16A0A075B6K0 115 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 ESYT3A0FGR9 886 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 POLBP06746 335 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 AMD1P17707 334 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 XRCC1P18887 633 aaPredicted RBP17.42■□□□□ 0.38
VCP-202ENST00000417448 SLC19A1P41440 591 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 ARCN1P48444 511 aaKnown RBP17.42■□□□□ 0.38
VCP-202ENST00000417448 RPS15P62841 145 aaKnown RBP17.42■□□□□ 0.38
VCP-202ENST00000417448 RAPSNQ13702 412 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 NAA30Q147X3 362 aaPredicted RBP17.42■□□□□ 0.38
VCP-202ENST00000417448 MORF4L2Q15014 288 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 DUPD1Q68J44 220 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 CERS6Q6ZMG9 384 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 MAATS1Q7Z4T9 603 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 HOOK3Q86VS8 718 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 AMZ2Q86W34 360 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 HPS6Q86YV9 775 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 MCEMP1Q8IX19 187 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 IQCKQ8N0W5 287 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 CFAP36Q96G28 342 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 SMAD5Q99717 465 aaKnown RBP17.42■□□□□ 0.38
VCP-202ENST00000417448 WDR83Q9BRX9 315 aaKnown RBP17.42■□□□□ 0.38
VCP-202ENST00000417448 ZCCHC2Q9C0B9 1178 aaKnown RBP17.42■□□□□ 0.38
VCP-202ENST00000417448 GRHL1Q9NZI5 618 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 RARRES3Q9UL19 164 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 CHMP2BQ9UQN3 213 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 FARSAQ9Y285 508 aaKnown RBP17.42■□□□□ 0.38
VCP-202ENST00000417448 WDR37Q9Y2I8 494 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 SPTBP11277 2137 aa17.42■□□□□ 0.38
VCP-202ENST00000417448 IGHV5-51A0A0C4DH38 117 aa17.41■□□□□ 0.38
VCP-202ENST00000417448 FAM237BA0A1B0GVD1 139 aa17.41■□□□□ 0.38
VCP-202ENST00000417448 PDZK1P1A8MUH7 402 aa17.41■□□□□ 0.38
VCP-202ENST00000417448 RALBP11234 206 aa17.41■□□□□ 0.38
VCP-202ENST00000417448 ELK3P41970 407 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms