RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 IFT80Q9P2H3 777 aaPredicted RBP6.75□□□□□ -1.33
COPS3-202ENST00000417352 AMFRQ9UKV5 643 aa6.75□□□□□ -1.33
COPS3-202ENST00000417352 POMT2Q9UKY4 750 aa6.75□□□□□ -1.33
COPS3-202ENST00000417352 PACSIN2Q9UNF0 486 aaPredicted RBP6.75□□□□□ -1.33
COPS3-202ENST00000417352 BTRCQ9Y297 605 aa6.75□□□□□ -1.33
COPS3-202ENST00000417352 PRRC2CQ9Y520 2896 aaKnown RBP6.75□□□□□ -1.33
COPS3-202ENST00000417352 PIKFYVEQ9Y2I7 2098 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 C17orf113A0A1B0GUU1 675 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 OR51F1A6NGY5 319 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 TCP11X1B4DZS4 312 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 MASP2O00187 686 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 PJA2O43164 708 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 FTCDO95954 541 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 IFNB1P01574 187 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 FTH1P02794 183 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 ALPPP05187 535 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 UQCRHP07919 91 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 RAB40ALP0C0E4 278 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 OR56A5P0C7T3 313 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 UGT2B7P16662 529 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 ITGA3P26006 1051 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 MSNP26038 577 aaKnown RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 SHMT2P34897 504 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 ZNF140P52738 457 aaPredicted RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 HADHBP55084 474 aaKnown RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 DCDP81605 110 aaKnown RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 SRSF11Q05519 484 aaKnown RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 HSPA14Q0VDF9 509 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 TBX2Q13207 712 aaPredicted RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 MRPL49Q13405 166 aaKnown RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 SNX1Q13596 522 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 NCF4Q15080 339 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 CYP2A13Q16696 494 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 P3H1Q32P28 736 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 IRAK1BP1Q5VVH5 260 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 LYPLAL1Q5VWZ2 237 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 SPESP1Q6UW49 350 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 UNC5AQ6ZN44 842 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 FAM20CQ8IXL6 584 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 ADGRF3Q8IZF5 1079 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 CARFQ8N187 725 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 CISD2Q8N5K1 135 aaKnown RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 ZBTB2Q8N680 514 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 C19orf47Q8N9M1 422 aaKnown RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 TMEM102Q8N9M5 508 aaPredicted RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 GALNT11Q8NCW6 608 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 ACRBPQ8NEB7 543 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 SSC4DQ8WTU2 575 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 C19orf60Q96EN9 201 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 TCTN2Q96GX1 697 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 CDKN2AIPNLQ96HQ2 116 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 LINC00615Q96LM1 132 aaPredicted RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 FER1L6-AS2Q96M78 137 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 DPH2Q9BQC3 489 aaPredicted RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 TMEM121Q9BTD3 319 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 YIPF2Q9BWQ6 316 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 OR52A5Q9H2C5 316 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 TFB2MQ9H5Q4 396 aaKnown RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 SYTL2Q9HCH5 934 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 PCMTD2Q9NV79 361 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 NLE1Q9NVX2 485 aaPredicted RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 CUEDC1Q9NWM3 386 aaPredicted RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 SEMA5BQ9P283 1151 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 DHCR7Q9UBM7 475 aaKnown RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 PLEKHB1Q9UF11 243 aaPredicted RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 POLG2Q9UHN1 485 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 FEZ2Q9UHY8 353 aaPredicted RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 ANAPC5Q9UJX4 755 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 SLC39A10Q9ULF5 831 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 CDYLQ9Y232 598 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 KLHL20Q9Y2M5 609 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 PCDHGA9Q9Y5G4 932 aaKnown RBP6.74□□□□□ -1.33
COPS3-202ENST00000417352 PRSS21Q9Y6M0 314 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 PTPN13Q12923 2485 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 MED13Q9UHV7 2174 aa6.74□□□□□ -1.33
COPS3-202ENST00000417352 RP1L1Q8IWN7 2480 aaPredicted RBP6.73□□□□□ -1.33
COPS3-202ENST00000417352 CCDC162PA2VCL2 907 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 F8W8V4 182 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 LIN7AO14910 233 aaPredicted RBP6.73□□□□□ -1.33
COPS3-202ENST00000417352 ZSCAN9O15535 394 aaPredicted RBP6.73□□□□□ -1.33
COPS3-202ENST00000417352 PSMD3O43242 534 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 SGTAO43765 313 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 OR1I1O60431 355 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 SEMA7AO75326 666 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 METTL18O95568 372 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 IGHA1P01876 353 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 CHRM5P08912 532 aaPredicted RBP6.73□□□□□ -1.33
COPS3-202ENST00000417352 CBSLP0DN79 551 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 CBSP35520 551 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 PPARGP37231 505 aaPredicted RBP6.73□□□□□ -1.33
COPS3-202ENST00000417352 GRIA3P42263 894 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 NSG1P42857 185 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 CD151P48509 253 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 CD97P48960 835 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 TERF1P54274 439 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 FOXL2P58012 376 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 PRAMEP78395 509 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 KIF5AQ12840 1032 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 RPA4Q13156 261 aa6.73□□□□□ -1.33
COPS3-202ENST00000417352 TSTA3Q13630 321 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms