RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 SEC14L1Q92503 715 aa12.49□□□□□ -0.41
LINC00339-202ENST00000416769 PPP1R2P1Q96PQ5 205 aa12.49□□□□□ -0.41
LINC00339-202ENST00000416769 FICDQ9BVA6 458 aa12.49□□□□□ -0.41
LINC00339-202ENST00000416769 ZCCHC2Q9C0B9 1178 aaKnown RBP12.49□□□□□ -0.41
LINC00339-202ENST00000416769 SPRTNQ9H040 489 aaPredicted RBP12.49□□□□□ -0.41
LINC00339-202ENST00000416769 SMOXQ9NWM0 555 aa12.49□□□□□ -0.41
LINC00339-202ENST00000416769 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.48□□□□□ -0.41
LINC00339-202ENST00000416769 PSMD3O43242 534 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 LDB2O43679 373 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 KCNJ13O60928 360 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 ZSCAN5DPP0CG00 497 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 PRF1P14222 555 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 CYP2A7P20853 494 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 PRDX3P30048 256 aaKnown RBP12.48□□□□□ -0.41
LINC00339-202ENST00000416769 XIAPP98170 497 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 PRKG2Q13237 762 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 PTK6Q13882 451 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 PRPSAP1Q14558 356 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 PPP1R7Q15435 360 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 ZNF658BQ4V348 819 aaPredicted RBP12.48□□□□□ -0.41
LINC00339-202ENST00000416769 PRUNE1Q86TP1 453 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 FAM20CQ8IXL6 584 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 SRRM1Q8IYB3 904 aaKnown RBP12.48□□□□□ -0.41
LINC00339-202ENST00000416769 LMNTD1Q8N9Z9 388 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 OR52E1Q8NGJ3 308 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 LCN9Q8WX39 176 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 TRAPPC9Q96Q05 1148 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 HGH1Q9BTY7 390 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 PITPNM3Q9BZ71 974 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 GBA3Q9H227 469 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 TRABDQ9H4I3 376 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 ASB8Q9H765 288 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 RRAGDQ9NQL2 400 aaPredicted RBP12.48□□□□□ -0.41
LINC00339-202ENST00000416769 RSPH14Q9UHP6 348 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 CDYLQ9Y232 598 aa12.48□□□□□ -0.41
LINC00339-202ENST00000416769 AAR2Q9Y312 384 aaKnown RBP12.48□□□□□ -0.41
LINC00339-202ENST00000416769 H3BMH7 237 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 STX7O15400 261 aaKnown RBP12.47□□□□□ -0.41
LINC00339-202ENST00000416769 TTI1O43156 1089 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 RAD51CO43502 376 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 ANXA9O76027 345 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 SRP72O76094 671 aaKnown RBP12.47□□□□□ -0.41
LINC00339-202ENST00000416769 SLU7O95391 586 aaKnown RBP12.47□□□□□ -0.41
LINC00339-202ENST00000416769 METTL18O95568 372 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 DDAH2O95865 285 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 GABRA4P48169 554 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 MPP3Q13368 585 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 MSLNQ13421 630 aaPredicted RBP12.47□□□□□ -0.41
LINC00339-202ENST00000416769 ITGA9Q13797 1035 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 TRIP13Q15645 432 aaPredicted RBP12.47□□□□□ -0.41
LINC00339-202ENST00000416769 BCL7AQ4VC05 210 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 CRB2Q5IJ48 1285 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 VWA5B1Q5TIE3 1220 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 MLIPQ5VWP3 458 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 C1QL3Q5VWW1 255 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 CUZD1Q86UP6 607 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 KLHDC8BQ8IXV7 354 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 ADGRF3Q8IZF5 1079 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 TMEM102Q8N9M5 508 aaPredicted RBP12.47□□□□□ -0.41
LINC00339-202ENST00000416769 OR8K5Q8NH50 307 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 DTX3LQ8TDB6 740 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 LRRC45Q96CN5 670 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 FERD3LQ96RJ6 166 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 MESP1Q9BRJ9 268 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 LRRC1Q9BTT6 524 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 OR52A5Q9H2C5 316 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 SRMSQ9H3Y6 488 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 ZNF552Q9H707 407 aaPredicted RBP12.47□□□□□ -0.41
LINC00339-202ENST00000416769 ETNK1Q9HBU6 452 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 C1GALT1Q9NS00 363 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 SPHK1Q9NYA1 384 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 DHCR7Q9UBM7 475 aaKnown RBP12.47□□□□□ -0.41
LINC00339-202ENST00000416769 PKP3Q9Y446 797 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 DNMT3AQ9Y6K1 912 aaPredicted RBP12.47□□□□□ -0.41
LINC00339-202ENST00000416769 PCM1Q15154 2024 aa12.47□□□□□ -0.41
LINC00339-202ENST00000416769 ANKUB1A6NFN9 424 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 TPBGLP0DKB5 382 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 PSMB4P28070 264 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 PRLHRP49683 370 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 GEMP55040 296 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 GPS1Q13098 491 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 PRKAA1Q13131 559 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 SPARCL1Q14515 664 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 KRT33BQ14525 404 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 C8orf74Q6P047 294 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 NAPRTQ6XQN6 538 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 MED25Q71SY5 747 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 PPP1R32Q7Z5V6 425 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 PCGF5Q86SE9 256 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 IQCKQ8N0W5 287 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 DTWD1Q8N5C7 304 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 NOA1Q8NC60 698 aaKnown RBP12.46□□□□□ -0.41
LINC00339-202ENST00000416769 ACVR1CQ8NER5 493 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 SGSM3Q96HU1 749 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 ERP44Q9BS26 406 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 SLC29A3Q9BZD2 475 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 COG4Q9H9E3 785 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 FANCEQ9HB96 536 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 ACTR10Q9NZ32 417 aa12.46□□□□□ -0.41
LINC00339-202ENST00000416769 HACD3Q9P035 362 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms