RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 BTN2A2Q8WVV5 523 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 OR8D1Q8WZ84 308 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 SMG7Q92540 1137 aaKnown RBP13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 ELMO1Q92556 727 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 USP7Q93009 1102 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 TMEM125Q96AQ2 219 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 TMEM159Q96B96 161 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 FBXL8Q96CD0 374 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 SLC45A3Q96JT2 553 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 MRGPRX3Q96LB0 322 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 TRAPPC9Q96Q05 1148 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 CDK15Q96Q40 435 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 CENPKQ9BS16 269 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 C1orf50Q9BV19 199 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 OSBPL11Q9BXB4 747 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 ALG2Q9H553 416 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 ELOVL6Q9H5J4 265 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 RMND5AQ9H871 391 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 PCDH12Q9NPG4 1184 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 CMTM6Q9NX76 183 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 OBP2AQ9NY56 170 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 PDE10AQ9Y233 779 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 GVINP1Q7Z2Y8 2422 aa13.18□□□□□ -0.3
SSR4P1-201ENST00000415143 ATG2AQ2TAZ0 1938 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 A0A1B0GTL3 188 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 EDDM13A0A1B0GTR0 161 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 C16orf96A6NNT2 1141 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 TTC34A8MYJ7 566 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 LOC730098B7Z3J9 87 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 PROB1E7EW31 1015 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 GFYI3L273 518 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 WNT9AO14904 365 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 AKAP10O43572 662 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 RNASEH2AO75792 299 aaKnown RBP13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 RSL1D1O76021 490 aaKnown RBP13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 CISD3P0C7P0 127 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 ELFN1P0C7U0 828 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 G6PDP11413 515 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 BMP2P12643 396 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 ARSAP15289 507 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 VARSP26640 1264 aaKnown RBP13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 GRIA3P42263 894 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 CASP2P42575 452 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 PNLIPRP1P54315 467 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 SH3BGRP55822 239 aaPredicted RBP13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 B4GALNT1Q00973 533 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 BOP1Q14137 746 aaKnown RBP13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 PDGFRLQ15198 375 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 SMAD2Q15796 467 aaKnown RBP13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 ADRM1Q16186 407 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 SLC5A9Q2M3M2 681 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 TIGD2Q4W5G0 525 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 TBCELQ5QJ74 424 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 C6orf10Q5SRN2 563 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 LIPJQ5W064 366 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 ZNF765Q7L2R6 523 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 DSG4Q86SJ6 1040 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 TICAM1Q8IUC6 712 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 TBC1D21Q8IYX1 336 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 NAT16Q8N8M0 369 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 L3MBTL4Q8NA19 623 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 SELENOMQ8WWX9 145 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 STARD8Q92502 1023 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 GLMNQ92990 594 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 METTL2AQ96IZ6 378 aaKnown RBP13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 CCDC138Q96M89 665 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 FAM83CQ9BQN1 747 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 CCM2Q9BSQ5 444 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 C9orf16Q9BUW7 83 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 DYRK4Q9NR20 520 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 POLR3HQ9Y535 204 aaPredicted RBP13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 ASB1Q9Y576 335 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 PCDHB3Q9Y5E6 796 aa13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 MTCL1Q9Y4B5 1905 aaKnown RBP13.17□□□□□ -0.3
SSR4P1-201ENST00000415143 VPS13AQ96RL7 3174 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 MED19A0JLT2 244 aaPredicted RBP13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 NPIPB8E9PQR5 432 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 FXYD1O00168 92 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 CLGNO14967 610 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 AP1G1O43747 822 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 KIF1CO43896 1103 aaKnown RBP13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 SLCO2B1O94956 709 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 CYP17A1P05093 508 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 UBTFL6P0CB48 400 aaPredicted RBP13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 C7P10643 843 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 CEBPBP17676 345 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 PRPH2P23942 346 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 GSK3BP49841 420 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 ATXN3P54252 364 aaPredicted RBP13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 RPL38P63173 70 aaKnown RBP13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 GTF2H3Q13889 308 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 CAPRIN1Q14444 709 aaKnown RBP13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 ACOX1Q15067 660 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 MAPKAPK3Q16644 382 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 HENMT1Q5T8I9 393 aaKnown RBP13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 NANOGP8Q6NSW7 305 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 CYP2R1Q6VVX0 501 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 MSANTD1Q6ZTZ1 278 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 NUDT18Q6ZVK8 323 aa13.16□□□□□ -0.3
SSR4P1-201ENST00000415143 CYP2U1Q7Z449 544 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms