RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 BTRCQ9Y297 605 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 PCDHB3Q9Y5E6 796 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 PTPRQQ9UMZ3 2332 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 ZFC3H1O60293 1989 aaKnown RBP9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 SDK2Q58EX2 2172 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 FAM237BA0A1B0GVD1 139 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 MAGEB16A2A368 324 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 B8ZZF3 427 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 MEN1O00255 615 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 TERTO14746 1132 aaKnown RBP9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 PFDN6O15212 129 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 ZNF749O43361 778 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 CPNE3O75131 537 aaKnown RBP9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 SLCO2B1O94956 709 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 ZIC2O95409 532 aaPredicted RBP9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 KLK3P07288 261 aaPredicted RBP9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 MLNP12872 115 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 TCP1P17987 556 aaKnown RBP9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 CD9P21926 228 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 RPS3P23396 243 aaKnown RBP eCLIP9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 PKLRP30613 574 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 GRIA3P42263 894 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 PTGIRP43119 386 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 FNTAP49354 379 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 POLE2P56282 527 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 MC1RQ01726 317 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 KYNUQ16719 465 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 PTCHD3Q3KNS1 767 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 ACSBG2Q5FVE4 666 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 COLEC12Q5KU26 742 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 PLEKHS1Q5SXH7 462 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 C1orf189Q5VU69 101 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 ZNF470Q6ECI4 717 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 KIAA0930Q6ICG6 404 aaPredicted RBP9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 TTC23LQ6PF05 361 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 CENPUQ71F23 418 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 LRRC6Q86X45 466 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 PPIL6Q8IXY8 311 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 CARFQ8N187 725 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 C19orf47Q8N9M1 422 aaKnown RBP9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 LINC01555Q8NAE3 123 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 FLVCR1-AS1Q8TAF5 88 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 SIGLEC10Q96LC7 697 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 PWWP2AQ96N64 755 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 FCRL4Q96PJ5 515 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 PITPNM3Q9BZ71 974 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 CHST8Q9H2A9 424 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 ACTR5Q9H9F9 607 aaPredicted RBP9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 XAB2Q9HCS7 855 aaKnown RBP9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 ZNF71Q9NQZ8 489 aaPredicted RBP9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 OR6C2Q9NZP2 312 aa9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 FARSAQ9Y285 508 aaKnown RBP9.83□□□□□ -0.84
NCKIPSD-202ENST00000413374 MGAQ8IWI9 3026 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 A0A0J9YY10 115 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 ZCWPW2A0A1B0GU75 182 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 E5RI56 91 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 E7EQ34 232 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 CES2O00748 559 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 DNALI1O14645 258 aaPredicted RBP9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 KPNA5O15131 536 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 KDM1AO60341 852 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 CREG1O75629 220 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 HAUS5O94927 633 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 C1orf105O95561 183 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 S1PR4O95977 384 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 PKMP14618 531 aaKnown RBP9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 RAB28P51157 221 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 ITGA1P56199 1179 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 RPS15P62841 145 aaKnown RBP9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 MRPS25P82663 173 aaKnown RBP9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 DHX9Q08211 1270 aaKnown RBP9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 TSTA3Q13630 321 aaPredicted RBP9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 KIR2DS3Q14952 304 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 SF1Q15637 639 aaKnown RBP9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 LONRF1Q17RB8 773 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 TYSND1Q2T9J0 566 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 HSP90AA5PQ58FG0 334 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 RNASEH2BQ5TBB1 312 aaKnown RBP9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 IZUMO3Q5VZ72 239 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 UNC5DQ6UXZ4 953 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 PRICKLE2Q7Z3G6 844 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 CREG2Q8IUH2 290 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 CILP2Q8IUL8 1156 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 DCUN1D3Q8IWE4 304 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 C17orf53Q8N3J3 647 aaPredicted RBP9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 OR8K5Q8NH50 307 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 APOBEC4Q8WW27 367 aaKnown RBP9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 TCTN2Q96GX1 697 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 PDLIM2Q96JY6 352 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 CATSPER2Q96P56 530 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 TCF12Q99081 682 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 SLC30A3Q99726 388 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 FAM117AQ9C073 453 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 ACTL8Q9H568 366 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 IARS2Q9NSE4 1012 aaKnown RBP9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 ABCF3Q9NUQ8 709 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 PCMTD2Q9NV79 361 aa9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 GEMIN8Q9NWZ8 242 aaKnown RBP9.82□□□□□ -0.84
NCKIPSD-202ENST00000413374 KCND3Q9UK17 655 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms