RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PROX2Q3B8N5 592 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 GPR139Q6DWJ6 353 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 CIAPIN1Q6FI81 312 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 ATRAIDQ6UW56 229 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 RAB44Q7Z6P3 723 aaPredicted RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 ADGRD2Q7Z7M1 963 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 ZNF786Q8N393 782 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 MINDY1Q8N5J2 469 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 OR1M1Q8NGA1 313 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 RAD54LQ92698 747 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 EXT2Q93063 718 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 DNAJC19Q96DA6 116 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 MEGF10Q96KG7 1140 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 MYRFLQ96LU7 910 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 QKIQ96PU8 341 aaKnown RBP eCLIP5.13□□□□□ -1.592e-6■■■■■ 30.4
HERC4-205ENST00000412272 POTEKPQ9BYX7 375 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 KLHL1Q9NR64 748 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 SARDHQ9UL12 918 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 NPFFR2Q9Y5X5 522 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 PEX16Q9Y5Y5 336 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 A0A0A0MRY4 1105 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 RFPL4AA6NLU0 287 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 AHRRA9YTQ3 701 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 E5RJQ4 531 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 RFPL4AL1F8VTS6 287 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 ACOT8O14734 319 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 SLC22A3O75751 556 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 CBX7O95931 251 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 PLATP00750 562 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 OPN1LWP04000 364 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 CTPS1P17812 591 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 TACR3P29371 465 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 NUP62P37198 522 aaPredicted RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 MBTD1Q05BQ5 628 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 ZNF211Q13398 564 aaPredicted RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 NEDD8Q15843 81 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 MICAQ29983 383 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 FBXO31Q5XUX0 539 aaPredicted RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 ZNF782Q6ZMW2 699 aaPredicted RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 GALNTL5Q7Z4T8 443 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 OR8H3Q8N146 312 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 TXNDC5Q8NBS9 432 aaKnown RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 ZMIZ2Q8NF64 920 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 BPIFB6Q8NFQ5 453 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 REPS1Q96D71 796 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 GPR137Q96N19 417 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 DCLRE1CQ96SD1 692 aaKnown RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 MND1Q9BWT6 205 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 PLA2G12BQ9BX93 195 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 COQ10BQ9H8M1 238 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 MINDY3Q9H8M7 445 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 TREM1Q9NP99 234 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 NOCTQ9UK39 431 aaKnown RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 CDV3Q9UKY7 258 aaKnown RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 BAIAP2Q9UQB8 552 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 TNFSF13BQ9Y275 285 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 KLHL20Q9Y2M5 609 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 ZNF330Q9Y3S2 320 aaPredicted RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 TCRBV7S2A1N4TA0A589 114 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 METTL21EPA6NDL7 271 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 FAM74A7A6NL05 159 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 E5RI56 91 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 HTRA2O43464 458 aaPredicted RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 NPHS1O60500 1241 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 VPS4BO75351 444 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 UGT2B17O75795 530 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 C1QBP02746 253 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 OR52Z1P0C646 297 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 PLS3P13797 630 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 MAGP20916 626 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 ACADLP28330 430 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 SHMT2P34897 504 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 HLCSP50747 726 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 UGT2B15P54855 530 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 KRR1Q13601 381 aaKnown RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 FAM74A3Q4VXF1 159 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 C16orf89Q6UX73 402 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 OSCARQ8IYS5 282 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 UBXN10Q96LJ8 280 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 PNMA5Q96PV4 448 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 LMF1Q96S06 567 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 CDCA3Q99618 268 aaPredicted RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 ADPGKQ9BRR6 497 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 LHPPQ9H008 270 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 SLC26A1Q9H2B4 701 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 DDX31Q9H8H2 851 aaKnown RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 MYOZ1Q9NP98 299 aaPredicted RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 PRDM7Q9NQW5 492 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 TOPORSQ9NS56 1045 aaPredicted RBP5.13□□□□□ -1.59
HERC4-205ENST00000412272 NKIRAS2Q9NYR9 191 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 COX16Q9P0S2 106 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 SLC17A7Q9P2U7 560 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 NUBP2Q9Y5Y2 271 aa5.13□□□□□ -1.59
HERC4-205ENST00000412272 NUDT19A8MXV4 375 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 B4E171 279 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 BTN3A3O00478 584 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 EFCAB14O75071 495 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 GATBO75879 557 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 SCAF4O95104 1147 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 OTCP00480 354 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms